Protein

MIA_06417_1

Length
725 amino acids

Browser: contig12:14154-16511+

Protein function

EGGNOG:0QDZFReverse transcriptase (RNA-dependent DNA polymerase)
CGD closest match:CAL0000185137orf19.2669Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A5DXY544.266%4975.76e-122Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DXY5_LODEL
MCA_01665_136.492%4961.92e-84MCA_01665_1
A0A161HJI4_9ASCO29.870%3851.95e-48Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
YCH4_YEAST37.354%2579.96e-50Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2
A0A1D8PLS1_CANAL25.151%4973.11e-35Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2669 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8888
Predicted cleavage: 81

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 725

Detailed signature matches

  1. Domain IPR013103
    Reverse transcriptase, RNA-dependent DNA polymerase
    1. PF07727 (RVT_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. SSF56672 (DNA/RNA p...)
  4. TMhelix
  5. TRANSMEMBRANE (Tran...)
  6. cd09272 (RNase_HI_R...)
  7. mobidb-lite (disord...)

Residue annotation

  1. active site cd09272
  2. RNA/DNA hybrid bin...

Protein sequence

>MIA_06417_1
MTLVRDLVLGLIRLPVLILVRVLVLGLVGLYRTSLLFLHIWFYWFLAVSVAVFVSSFSSSLVVHKPRSVRRILPSSSAPL
ESPTLPSLPSSPILPTSDQDPSVSSPIGPSRSDLLQVGSPAGESDNSGDSGISQRGGDIGFHPDVIASSPSPPSVELEIV
PLIKSHLRLILSSLWTKLDHFAESRSRVICSSLAFCYSSQAPSSHDFVAPPSKHRCDDSAKLAASSVVPAKRRAEQESIS
YRRLKSLRFEYDDVALLVFTDPTTFEQAMSSEDAEFWLEACVLEMSSLNRNRTWDLQMVFKIKRKADGSIERYKARLVCI
GFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFIVKGQESKVCHLNKSLY
GLKQAPLCWNEKIHGALVKLGFGRGSAMVIIALYVDDLLIAGSSTHAIANTKSSLSSMFKMKDLGLVEQFLGMRVKQSPY
HITVDVCRYIVDMLEEFGMQNCSSVKTPLPTRDLSDFSESDAAADPSLYRSIIGKLIYAANCARPDLAVAVSFLCRYMQN
PKSMHMEAAKHTLRYLKGSAQLGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGPASSSVESEYMSLSDASKECFWINQL
LSLCQIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETL
RVSLE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.