Protein

MIA_06280_1

Length
110 amino acids


Browser: contig10:778194-778636-

Protein function

EGGNOG:0PQ6FRPC11DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)
SGD closest match:S000002452RPC11DNA-directed RNA polymerase III subunit RPC10
CGD closest match:CAL0000198439RPC11DNA-directed RNA polymerase subunit

Protein alignments

%idAln lengthE-value
MCA_05677_190.00%1102e-74MCA_05677_1
A0A0J9X5L0_GEOCN76.79%1121e-62DNA-directed RNA polymerase subunit OS=Geotrichum candidum GN=BN980_GECA03s06203g PE=3 SV=1
Q5A5N9_CANAL72.32%1129e-57DNA-directed RNA polymerase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPC11 PE=3 SV=1
A0A060TJ31_BLAAD67.86%1127e-57DNA-directed RNA polymerase subunit OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D43538g PE=3 SV=1
UniRef50_A3LW9470.54%1123e-51DNA-directed RNA polymerase subunit n=158 Tax=Fungi TaxID=4751 RepID=A3LW94_PICST
A0A1E3PEJ2_9ASCO66.96%1124e-53DNA-directed RNA polymerase subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_27623 PE=3 SV=1
RPC10_YEAST66.37%1132e-50DNA-directed RNA polymerase III subunit RPC10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC11 PE=1 SV=1
A0A1E4TMG5_9ASCO57.27%1102e-42DNA-directed RNA polymerase subunit OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_95448 PE=3 SV=1
Q6C866_YARLI54.05%1113e-41DNA-directed RNA polymerase subunit OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D22308g PE=3 SV=1
A0A167CJP6_9ASCO34.85%662e-09Dst1p OS=Sugiyamaella lignohabitans GN=DST1 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1039

Protein family membership

Domains and repeats

1 20 40 60 80 100 110

Detailed signature matches

    1. PIRSF005586 (RNApol...)
    1. PF02150 (RNA_POL_M_...)
    2. SM00661 (rpol9cneu)
    1. PS51133 (ZF_TFIIS_2)
    2. PF01096 (TFIIS_C)
    3. PS00466 (ZF_TFIIS_1)
    4. SM00440 (Cys4_2)
    1. cd10509 (Zn-ribbon_...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF57783 (Zinc beta...)

Residue annotation

  1. Zn binding site cd...

Protein sequence

>MIA_06280_1
MLTFCPHCSNLLQISAGSSGYNRFECRTCPYEFPIVEPMVMYHRRKTDRKEIDDVLGGQGSWDNVDQTRTQCPACGHDKA
YFFQLQIRSADEPMTTFYKCVNCTHQWREN

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006379 mRNA cleavage

Molecular Function

GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding

Cellular Component

None predicted.