Protein

MIA_06257_1

Length
256 amino acids

Browser: contig10:735172-736057-

Protein function

EGGNOG:0PFAQFG06894.1Ribosome maturation protein
SGD closest match:S000004012SDO1Ribosome maturation protein SDO1
CGD closest match:CAL0000178770orf19.2708Guanine nucleotide exchange factor

Protein alignments

%idAln lengthE-value
MCA_05680_174.517%2591.48e-143MCA_05680_1
A0A0J9XH12_GEOCN74.704%2539.16e-140Similar to Saccharomyces cerevisiae YLR022C SDO1 Essential protein involved in 60S ribosome maturation OS=Geotrichum candidum GN=BN980_GECA16s00582g PE=4 SV=1
A0A060T3C1_BLAAD68.800%2504.57e-124ARAD1A08492p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A08492g PE=4 SV=1
A0A1E3PD67_9ASCO60.236%2548.51e-114Shwachman-Bodian-diamond syndrome protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53802 PE=4 SV=1
A0A1E4TKP6_9ASCO59.375%2569.28e-111Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_917 PE=4 SV=1
Q6C0F0_YARLI59.200%2501.40e-95YALI0F25267p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F25267g PE=4 SV=1
A0A167ER49_9ASCO61.972%2132.19e-91Guanine nucleotide exchange factor SDO1 OS=Sugiyamaella lignohabitans GN=SDO1 PE=4 SV=1
UniRef50_A0A167ER4961.972%2136.02e-88Guanine nucleotide exchange factor SDO1 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167ER49_9ASCO
SDO1_YEAST56.000%2508.68e-91Ribosome maturation protein SDO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDO1 PE=1 SV=1
Q5AF99_CANAL52.549%2553.62e-88Guanine nucleotide exchange factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2708 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1877

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 256

Detailed signature matches

  1. Family IPR002140
    Ribosome maturation protein Sdo1/SBDS
    1. TIGR00291
  2. Domain IPR019783
    Ribosome maturation protein SBDS, N-terminal
    1. SSF89895 (FYSH domain)
    2. PF01172 (SBDS)
    3. G3DSA:3.30.12...
  3. Domain IPR018978
    Ribosome maturation protein SBDS, C-terminal
    1. PF09377 (SBDS_C)
  4. SITE IPR018023
    Ribosome maturation protein SBDS, conserved site
    1. PS01267 (UPF0023)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. SSF109728 (Hypothet...)

Protein sequence

>MIA_06257_1
MPINQPSGNIKLTNVSLVRIRKGKKRFEIACYQNKVQDWRKGVEKDLDEVLQIPQVFFNVSKGQVASQDDLKESFGITDI
DTVIKEILKKGELQVGGKERQAQASQIRAETLQIVASKCINPNNKRPYPTTIIEKALQELGFNFVSNKSAKSQALDAIKL
LVDKQVIPIVRARMKIRVSASGSSNVKDAKKYSENIKSMFTEIEDEDFSVNLWEIVGYIDPGTFRKLDETVQTESKNRAI
VEVLDTAVVQQSDDRL

GO term prediction

Biological Process

GO:0042254 ribosome biogenesis
GO:0042256 mature ribosome assembly

Molecular Function

None predicted.

Cellular Component

None predicted.