Protein
MIA_06238_1
Length
467 amino acids
Browser: contig10:686925-688329-
Protein function
| EGGNOG: | 0PG61 | PRP46 | factor PRP46 |
|---|---|---|---|
| SGD closest match: | S000006072 | PRP46 | Pre-mRNA-splicing factor PRP46 |
| CGD closest match: | CAL0000199442 | PRP46 | Pre-mRNA-splicing factor PRP46 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_01255_1 | 68.542% | 480 | 0.0 | MCA_01255_1 |
| A0A0J9XIA6_GEOCN | 67.511% | 474 | 0.0 | Similar to Saccharomyces cerevisiae YPL151C PRP46 Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2 OS=Geotrichum candidum GN=BN980_GECA16s01440g PE=4 SV=1 |
| A0A1E3PD03_9ASCO | 59.829% | 468 | 0.0 | Putative mRNA splicing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53567 PE=4 SV=1 |
| A0A167C3W8_9ASCO | 75.076% | 329 | 0.0 | Prp46p OS=Sugiyamaella lignohabitans GN=PRP46 PE=4 SV=1 |
| A0A060TCD3_BLAAD | 76.708% | 322 | 0.0 | ARAD1D40854p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D40854g PE=4 SV=1 |
| UniRef50_K0KGD8 | 56.635% | 422 | 0.0 | Putative WD repeat-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=K0KGD8_WICCF |
| PRP46_YARLI | 63.145% | 407 | 0.0 | Pre-mRNA-splicing factor PRP46 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PRP46 PE=3 SV=2 |
| A0A1E4TAT2_9ASCO | 66.556% | 302 | 2.59e-155 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29083 PE=4 SV=1 |
| PRP46_YEAST | 48.499% | 433 | 3.39e-152 | Pre-mRNA-splicing factor PRP46 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP46 PE=1 SV=1 |
| PRP46_CANAL | 47.152% | 316 | 2.46e-99 | Pre-mRNA-splicing factor PRP46 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PRP46 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0734
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
467
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_06238_1 MALFYGDPDRIDYDAIKSTADSRVKAATTGLFGDALLPLDDSPATPAKLRTLHKFRAEYGPSQTLPTYVQRKIDAAAAKR KPAAGLTKPATNSPSLDAPTRKLLQDIPIPSESSALAIRHKHTPSSSSLINNNLHIQEKPQWHRPWKLMRVINGHQGWVR SVCVEPDNQWFATGSSDRTIKIWDLASGQLRLSLTGHIMAIRGLAVSDRHPYLFSAGEDKMVKCWDLETNKVVRHYHGHL SGVYSLALHPTLDVLVSAGNDAVARVWDIRTRQPIHVLSGHKAAITQVRCQASDPQVVTTSVDTTVRLWDLAAGKTTTVL THHKKPVRGLALHPEEFTFASASRDNIKQWKFPDGDFMNNFYPPLNSIVNTLSVNQDGVMFAGADNGAMGFFDWKTGHKF QETATIAGPGSLEAENGIFASTFDQSGIRLITAEADKSIKIWKEDDQATPESHPGIPWKPRLGRQNY
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.