Protein

MIA_06017_1

Length
873 amino acids

Browser: contig10:6435-9083+

Protein function

EGGNOG:0QDZFReverse transcriptase (RNA-dependent DNA polymerase)
CGD closest match:CAL0000201372orf19.2372Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A5DXY547.106%5011.20e-140Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DXY5_LODEL
MCA_01665_138.508%4963.50e-100MCA_01665_1
YCH4_YEAST38.028%2841.35e-60Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2
A0A161HJI4_9ASCO28.889%4958.57e-55Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
A0A1D8PR73_CANAL27.422%5474.73e-44Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2372 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0034

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 873

Detailed signature matches

  1. Domain IPR013103
    Reverse transcriptase, RNA-dependent DNA polymerase
    1. PF07727 (RVT_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF56672 (DNA/RNA p...)
  2. cd09272 (RNase_HI_R...)
  3. mobidb-lite (disord...)

Residue annotation

  1. active site cd09272
  2. RNA/DNA hybrid bin...

Protein sequence

>MIA_06017_1
MLNSDVYFDESQFPFMKNDKELSSNASGIAFGIGCGSGSMSGPRADCNDSGTGSSVGLNSIAGSNSSSGSSFGSRRSLPD
VTSVSGSGSSASSTSGSTGSSPTCSPSPSLSPSPSLSSSPRSSSSLVVHKPRSVRRILPSSSAPLESPTLPSLPSSPILP
SSDQDPSVSSPIGPSQSDLLQVGSPAGESDNSGDSGISQRGGDIGFHPDVIASSPSPPSVELEIVPLDQEPPSSDLVKSL
DQAGVSVDTKDDTQAILPKSRSRVVAVRLPSVTPAKRPSSHDFVAPPSKHRCDDSAKLAASSVVPAKRRAEEESISYRRL
KSLRFEYDDVALLVFTDPTTFEQAMSSEDAEFWLEACVLEMSSLKRNRTWDLVDLPPGRKAINSKWVFKIKRKADGSIER
YKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFIVKGQESKV
CHLNKSLYGLKQAPLCWNEKIHGALVKLGFVRNESDYGVYTKGRGSAMVIIALYVDDLLIAGNSTQAIANTKSSLSSMFK
MKDLGLVEQFLGMRVKQSPYHITVDVSRYIVDMLRSLTPLPTRDLSDFSESDAAADPSLYRSIIGKLIYAANCARPDLAV
AVSFLCRYMQNPKSMHMEAAKHTLRYLKGSAQLGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACR
KQVSPASSSVESEYMSLSDASKECFWINQLLSLCQIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRS
GVIHLEYLDTQVMFADMFTKNLGRVKFETLRGLLGMKAVGDSATRGGVEHAMLSQTSACENCWEIMVDGLCLF

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.