Protein

MIA_05932_1

Length
258 amino acids


Browser: contig09:749916-750693+

Protein function

EGGNOG:0PJWCCWC24factor cwc24
SGD closest match:S000004315CWC24Pre-mRNA-splicing factor CWC24
CGD closest match:CAL0000187163CWC24Pre-mRNA-splicing factor CWC24

Protein alignments

%idAln lengthE-value
A0A0J9YHJ5_GEOCN47.945%1464.51e-37Similar to Saccharomyces cerevisiae YLR323C CWC24 Essential protein component of a complex containing Cef1p OS=Geotrichum candidum GN=BN980_GECA01s05400g PE=4 SV=1
UniRef50_A0A0J9YHJ547.945%1469.22e-34Similar to Saccharomyces cerevisiae YLR323C CWC24 Essential protein component of a complex containing Cef1p n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YHJ5_GEOCN
A0A1E3PI40_9ASCO47.656%1281.33e-37Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_10408 PE=4 SV=1
A0A060T0P6_BLAAD46.667%1504.75e-36ARAD1C14674p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C14674g PE=4 SV=1
CWC24_YARLI50.794%1261.70e-35Pre-mRNA-splicing factor CWC24 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC24 PE=3 SV=1
A0A167D8Z6_9ASCO43.671%1583.45e-32Cwc24p OS=Sugiyamaella lignohabitans GN=CWC24 PE=4 SV=1
CWC24_YEAST36.986%1463.99e-24Pre-mRNA-splicing factor CWC24 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC24 PE=1 SV=1
MCA_02351_184.615%391.12e-20MCA_02351_1
CWC24_CANAL34.328%1341.82e-20Pre-mRNA-splicing factor CWC24 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC24 PE=3 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5327
Predicted cleavage: 15

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 258

Detailed signature matches

    1. SSF90229 (CCCH zinc...)
    2. SM00356 (c3hfinal6)
    3. PS50103 (ZF_C3H1)
    4. PF00642 (zf-CCCH)
    1. SM00184 (ring_2)
    2. PS50089 (ZF_RING_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. PF13923 (zf-C3HC4_2)
  2. SSF57850 (RING/U-box)
  3. mobidb-lite (disord...)

Protein sequence

>MIA_05932_1
MFKKRKISKSSLSQKLSVRSEDPQPQTPSNPTQKSPDPDLPPPLDQDKDPKQPVDTPDEQPPPKDEEPVVKRRRVNDSLP
LSSKPIPTSSKPSSLAATTPAPPVVARFGPSRKLASQNAGTAGNGGVQTDYAPDVCKDYKQTGFCGYGDTCKFLHMREDY
AAGWQIDRAWAAQQRERAAGEKARDQEKDKEDEETKQSNVATVCPLCLGPLAAPVITKECGHVFCEKCFLGEFKKRHECK
VCGESLSGIVSPYRPVKS

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0046872 metal ion binding

Cellular Component

None predicted.