Protein
MIA_05895_1
Length
836 amino acids
Browser: contig09:639954-642582-
Protein function
| EGGNOG: | 0PG85 | FG01545.1 | RNA helicase |
|---|---|---|---|
| SGD closest match: | S000003088 | PRP43 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 |
| CGD closest match: | CAL0000197565 | PRP22 | DEAH-box ATP-dependent RNA helicase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03826_1 | 31.622% | 857 | 5.06e-115 | MCA_03826_1 |
| A0A0J9XHD3_GEOCN | 29.146% | 820 | 6.64e-92 | Similar to Saccharomyces cerevisiae YGL120C PRP43 RNA helicase in the DEAH-box family OS=Geotrichum candidum GN=BN980_GECA16s02188g PE=4 SV=1 |
| UniRef50_A0A0J9XHD3 | 29.146% | 820 | 1.36e-88 | Similar to Saccharomyces cerevisiae YGL120C PRP43 RNA helicase in the DEAH-box family n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHD3_GEOCN |
| A0A167CU84_9ASCO | 22.459% | 846 | 1.84e-35 | DEAH-box ATP-dependent RNA helicase PRP22 OS=Sugiyamaella lignohabitans GN=PRP22 PE=4 SV=1 |
| A0A060TCL8_BLAAD | 23.266% | 692 | 1.79e-33 | ARAD1D00572p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D00572g PE=4 SV=1 |
| Q6C9M4_YARLI | 23.055% | 694 | 1.33e-31 | YALI0D09955p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D09955g PE=4 SV=1 |
| A0A1E4TFZ5_9ASCO | 21.777% | 698 | 3.17e-31 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_108233 PE=4 SV=1 |
| A0A1E3PNS0_9ASCO | 22.270% | 705 | 5.10e-29 | ATP-dependent RNA helicase DHX8 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_40141 PE=4 SV=1 |
| A0A1D8PP74_CANAL | 23.155% | 691 | 7.37e-28 | DEAH-box ATP-dependent RNA helicase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PRP22 PE=4 SV=1 |
| PRP43_YEAST | 22.774% | 685 | 6.42e-28 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP43 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0383
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
836
Detailed signature matches
-
-
SSF52540 (P-loop co...)
-
no IPR
Unintegrated signatures
Protein sequence
>MIA_05895_1 MNHAGYAGSLNDPALDSHTLPYIRSLFSSMASSSINIVVGSPLSNYATEIPLALFEHGYTSQKQSILVSNPHEDRVKATA ARAVRDYSNNQNDQPSYTSSGLGFLVGFSLPFLSATSTATCIEYVSSDIMTQEIAIDPLLSNRRVLIIDDIHLREAWTDV ALGLLRSIIEYRQNKSVKREDNLPDFNLILCISPTCPQLIDMLWDFFTINGSQSKPSITILDDLTLNSLPVETYHLNEPI SNYLDKTLDVLLTVFSQDYLSLDKKFAAKENSYDIIVFVPTRHDVQHLVRLASNELPHRLRENLSVHHSNIIVLPCHEKL SVSEKQDLYNTEYFSDNKQETKTWRVIIATNAAENDYALMASRRITCVIDTGLDSVNISSSGAAIRTRSISKSKAEIRKN MASHGIKGIGKCFRLYRKAYLIQIMPFNDDPQLMTLMSVTGASSSLTDINGLLETVTLRLFSFQIKSITTEVNFLPPLTL PPNPLQNYSSTSKASPKNSVFQGIDKSLLNLFYAGCIDSELKLTNTGQLVAQLGSVPISFARAIIASSGIDHLDHTCGGC LYEMITITAMYLAGGLIKTFVEPSSSSLSSFGSVSQSSAAAAARLEFQAIEGDAVTLLNVFEAYLRKAHPPNLGKNNNPP NVPRWAADKFLNYKTLLRAEGIRTQLASDAERIGLTKSNILTKNKNKSPIVERICRSFCKGFFMSAAKRTYAATDDDLEK ITNQSRRRNDSGIRYELINTTSTIRTNQNKSGGGEDTISVRAHGLSVGSMSEFAQRADTRQLFGGSDSSELESGSPWVIY TGMSEYGQGDWYLESIIPVRREWLVDSMYYKEVRPT
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0004386 helicase activity
Cellular Component
None predicted.