Protein
MIA_05866_1
Length
551 amino acids
Browser: contig09:562959-564615-
Protein function
| EGGNOG: | 0PHN6 | FG05565.1 | CCR4-NOT transcription complex subunit 7 |
|---|---|---|---|
| SGD closest match: | S000005335 | POP2 | Poly(A) ribonuclease POP2 |
| CGD closest match: | CAL0000180752 | POP2 | CCR4-NOT core DEDD family RNase subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_04024_1 | 65.414% | 266 | 4.01e-123 | MCA_04024_1 |
| A0A0J9X3N3_GEOCN | 63.740% | 262 | 1.22e-119 | Similar to Saccharomyces cerevisiae YNR052C POP2 RNase of the DEDD superfamily OS=Geotrichum candidum GN=BN980_GECA01s10922g PE=4 SV=1 |
| UniRef50_A0A0J9X3N3 | 63.740% | 262 | 2.49e-116 | Similar to Saccharomyces cerevisiae YNR052C POP2 RNase of the DEDD superfamily n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3N3_GEOCN |
| A0A161HUH4_9ASCO | 55.515% | 272 | 2.26e-105 | CCR4-NOT core DEDD family RNase subunit POP2 OS=Sugiyamaella lignohabitans GN=POP2 PE=4 SV=1 |
| A0A060T7S2_BLAAD | 53.992% | 263 | 4.95e-99 | ARAD1C24222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C24222g PE=4 SV=1 |
| A0A1E3PLC8_9ASCO | 49.301% | 286 | 1.15e-87 | Ribonuclease H-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82128 PE=4 SV=1 |
| Q6CEV9_YARLI | 51.172% | 256 | 5.77e-86 | YALI0B12496p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B12496g PE=4 SV=1 |
| A0A1E4T9B4_9ASCO | 43.922% | 255 | 4.27e-75 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29600 PE=4 SV=1 |
| POP2_YEAST | 37.956% | 274 | 4.82e-62 | Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POP2 PE=1 SV=2 |
| Q5A8L5_CANAL | 34.483% | 290 | 1.09e-48 | CCR4-NOT core DEDD family RNase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POP2 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0049
Predicted cleavage: 12
Protein family membership
- Ribonuclease CAF1 (IPR006941)
Domains and repeats
-
Domain
1
100
200
300
400
500
551
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_05866_1 MRSAFPPGTRMVGNPPGMMMGQGMMPPQMLQQGQNPQTQQAGQPQQGNVVGQYPGAYINAQQQQQQQQQQQQYSRIQQQS VLNQQQPQQNQHHNHNNHGHNHNHNQHHNNHNHNHNQHQHHNQQQQQNQPNQQYQPYGYAAQQQQQLQQQLPTSASAQYG NIPGMGNIPGGAGGAPNLYPVAPSGADQAQQQQQQQVQQQQQQQQQQQQQVAAAAAAAAAAQAQSQIAESIRHVWRWNLE EQMAVLREVVTKYKYISLDCKFPGIVARPIGTFKTTSEYHYQTLRANVDILTVVQIGMTFSDEYGDRPPNSTWQFNFKFN EREDMASKDGLEILRQSGVNFDMLAVEGIDVFSFAELLLTSGLVLDPEINWITFHSGYDLGYLLSVMLNSSLPAEEMAFL DLVHLYFPNVWDLKYILRSLSFPPRATLYEVAEDFQIMSGNAIFSAMIASGNEALLTSVIYFEMRKLSNDAALSKLAGRL FGLGEGLASGGAATSTNTTTSSNTGSNKALGNNNSGSVNVNNSLSTKITNSPRVRSSGINITSPASKQTDS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.