Protein
MCA_04024_1
Length
493 amino acids
Description: CCR4-NOT transcription complex subunit 7/8
Browser: contigC:1796722-1798204+
RNA-seq: read pairs 3218, FPKM 80.5, percentile rank 75.4% (100% = highest expression)
Protein function
| Annotation: | CCR4-NOT transcription complex subunit 7/8 | ||
|---|---|---|---|
| KEGG: | K12581 | CNOT7_8 | CCR4-NOT transcription complex subunit 7/8 |
| EGGNOG: | 0PHN6 | FG05565.1 | CCR4-NOT transcription complex subunit 7 |
| SGD closest match: | S000005335 | POP2 | Poly(A) ribonuclease POP2 |
| CGD closest match: | CAL0000180752 | POP2 | CCR4-NOT core DEDD family RNase subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05866_1 | 65.78% | 263 | 3e-121 | MIA_05866_1 |
| A0A0J9X3N3_GEOCN | 61.22% | 263 | 3e-110 | Similar to Saccharomyces cerevisiae YNR052C POP2 RNase of the DEDD superfamily OS=Geotrichum candidum GN=BN980_GECA01s10922g PE=4 SV=1 |
| UniRef50_A0A0J9X3N3 | 61.22% | 263 | 5e-107 | Similar to Saccharomyces cerevisiae YNR052C POP2 RNase of the DEDD superfamily n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3N3_GEOCN |
| A0A161HUH4_9ASCO | 55.26% | 266 | 1e-96 | CCR4-NOT core DEDD family RNase subunit POP2 OS=Sugiyamaella lignohabitans GN=POP2 PE=4 SV=1 |
| A0A060T7S2_BLAAD | 50.90% | 279 | 9e-93 | ARAD1C24222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C24222g PE=4 SV=1 |
| A0A1E3PLC8_9ASCO | 47.02% | 285 | 1e-82 | Ribonuclease H-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82128 PE=4 SV=1 |
| Q6CEV9_YARLI | 50.57% | 261 | 3e-82 | YALI0B12496p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B12496g PE=4 SV=1 |
| A0A1E4T9B4_9ASCO | 42.65% | 272 | 3e-69 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29600 PE=4 SV=1 |
| POP2_YEAST | 43.16% | 190 | 6e-56 | Poly(A) ribonuclease POP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=POP2 PE=1 SV=2 |
| Q5A8L5_CANAL | 41.67% | 204 | 1e-45 | CCR4-NOT core DEDD family RNase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=POP2 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0047
Predicted cleavage: 12
Protein family membership
- Ribonuclease CAF1 (IPR006941)
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
493
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_04024_1 MRSSFPQGNRMVGNPPGVIMNQGIIPPQMMQQQQPQQGPQQQQNSTGQYPGAYINNGPPQQQYNRMQQQQQQQQQPPHQQ HHQQHHQPQHHQHQHQPHQQQQQSQNQNHGQPPQSQIQMFQNNGNANNFGYNMQPHIQPLGNGLYSSSGIQGMPNMPSSN SNIPGMYAGSSTNPDVVLSGTPAGVQASLHTSRGNLQQQQAQQQPQQALLSAQPTEDVRNVWHWNLLENMAILREIIKRY NFISLECKFPGIVARPIGTFKSTYEYHYQTLRANVDILQVVQVSMTFSDEFGNRPPVSTWQFNFKFNVCEDMSSIDGIEL LRQSGVNFEMLEVEGIDIFAFAEMLISSGLVLNPDIHWITFHSGYDLGYLLSLMINTKLPAEKTEFIKYINMYFPSVWDV KYILRSLSISNKSTLLEIAEDIQLRLSQAGDNNGFAALTNLNHYNEALLTSIIFFETRKLINDLMALSNCRSRLFGLVHD PETPSSGTIETSS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.