Protein

MIA_05636_1

Length
1,065 amino acids

Browser: contig08:976155-979400-

Protein function

EGGNOG:0PG6FPGUG_01499DNA repair protein
SGD closest match:S000005943RAD1DNA repair protein RAD1
CGD closest match:CAL0000176746RAD1SsDNA endodeoxyribonuclease

Protein alignments

%idAln lengthE-value
MCA_03449_151.484%10780.0MCA_03449_1
A0A0J9X8H8_GEOCN44.135%10400.0Similar to Saccharomyces cerevisiae YPL022W RAD1 Single-stranded DNA endonuclease (With Rad10p) OS=Geotrichum candidum GN=BN980_GECA05s02034g PE=4 SV=1
UniRef50_A0A0J9X8H844.135%10400.0Similar to Saccharomyces cerevisiae YPL022W RAD1 Single-stranded DNA endonuclease (With Rad10p) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8H8_GEOCN
A0A1E3PKQ6_9ASCO43.276%9890.0Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82819 PE=4 SV=1
A0A060TBX8_BLAAD37.288%10030.0ARAD1B12254p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B12254g PE=4 SV=1
Q6CDP9_YARLI36.971%10170.0YALI0B22242p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B22242g PE=4 SV=1
A0A167E6D5_9ASCO36.905%10087.78e-177SsDNA endodeoxyribonuclease RAD1 OS=Sugiyamaella lignohabitans GN=RAD1 PE=4 SV=1
A0A1D8PIP5_CANAL37.263%10011.46e-177SsDNA endodeoxyribonuclease OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD1 PE=4 SV=1
RAD1_YEAST34.041%10376.94e-152DNA repair protein RAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD1 PE=1 SV=1
A0A1E4TJK1_9ASCO32.535%10022.94e-154Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20121 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0597

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 1000 1065

Detailed signature matches

  1. Domain IPR011335
    Restriction endonuclease type II-like
    1. SSF52980 (Restricti...)
  2. Domain IPR006166
    ERCC4 domain
    1. PF02732 (ERCC4)
    2. SM00891 (ERCC4_2)
  3. Domain IPR010994
    RuvA domain 2-like
    1. SSF47781 (RuvA doma...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.15...
  2. G3DSA:3.40.50...
  3. PF14520 (HHH_5)
  4. mobidb-lite (disord...)

Protein sequence

>MIA_05636_1
MIKNKGISKETDSLKSHHEDLDTSLFVGEIDNNDMDIKERLYVSNENEDINIEKQIGTFDDKQGPSKKTLAEMEKLSDIK
DHKNEYFQKLPITLSVVLPFQKRIVVEMLKTDSLLILGRGMGYLKIISNLIHALDVCGSYISSPELELSNKKTNKNNLVI
VLGTREYESELIAQELRELSIIDEIFMRCKRANGIKIINTDSTGTMEKRKKLYIQGGVFFVTPRIFVVDLLCHVIDPTVV
SGILVSHAEQVTETSVIAFILRLYRQQNKTGFIKALSDDAEKFSGFSQLATYMKNLHISKISLWPRFHVSVTDSIDLQHS
VYLNKKRGQWVKPHAIDVKSVIEIEVQLTPSMAIIQQSILSCIEMCISMIRKFNSKIIEMEEWNINNALTMNFDFVIRQQ
LEPFWHRISQQTKTNVMDLTTLRQLLSNLLHLDSISFYKMLETIWMTNSTNDSFRRDIQNSWIYFDEANPLFATAKERAF
GKKKITRSEICNEENQVSGVGIDIEELPKWDQLAKILEEVALATKYQNVVGPILIMCSNRSTARQLSLYLNHSKKIENLG
SFFFSGKSYMKNILNDYQKWKKGFVKIKKELSSSTKNSRVYDATEAKEADNTNKFSMSSSSNYNKRRRVRGGSQASLISR
TDKQYSKDKASFEGDDEDLKNLEKISAVFDNSSYCDAEDIEINGSSDSYTILDNRNLIVIHVYDQLNAEFLLPELQPSCV
IMYEPNPSFIRNLEIYRSSNPQLQVKVYFMYYGYSVEEQKYLGSVRREKESFTKLIREKSKLPAVITNDVETHNFDERFR
HMAALANKTTRIAGGQLPQNINPVVIVDFREFRSSLPFCLHTNNIGIVPVMLIVGDYVLSPRICVERKSIPDLISSFRDG
RIFTQCESMFRFYDKPILLIEFDESKSFSLEPFGETPGLNGSGKFTNISSDAIKVIQEKIQGKLMLLLLQFPRLRIIWSM
SPRHTAEIFYDLKLMDSEQPDPLVAGSCGIDSRMLISKSDQKYNRPAIDILKTIPGINPHNFRAIIDHVKSLQELCSLSK
DELTKLIGKENMQKVQNFLNKDLLK

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003677 DNA binding
GO:0004518 nuclease activity

Cellular Component

None predicted.