Protein

MIA_05624_1

Length
332 amino acids

Browser: contig08:952602-953601+

Protein function

EGGNOG:0PH5YFG01208.1replication factor C subunit
SGD closest match:S000003829RFC2Replication factor C subunit 2
CGD closest match:CAL0000195843RFC2Replication factor C subunit 2

Protein alignments

%idAln lengthE-value
MCA_00757_164.955%3317.28e-151MCA_00757_1
A0A0J9X3N0_GEOCN61.424%3371.46e-142Similar to saccharomyces cerevisiae YJR068W RFC2 Subunit of heteropentameric Replication factor C (RF-C) OS=Geotrichum candidum GN=BN980_GECA02s01011g PE=4 SV=1
A0A1E3PFE3_9ASCO59.036%3328.25e-136p-loop containing nucleoside triphosphate hydrolase protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_28048 PE=4 SV=1
A0A060TE21_BLAAD58.507%3351.80e-135ARAD1D12144p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D12144g PE=4 SV=1
A0A167FC67_9ASCO55.172%3487.76e-133Replication factor C subunit 2 OS=Sugiyamaella lignohabitans GN=RFC2 PE=4 SV=1
UniRef50_C7YKC655.046%3273.34e-124Predicted protein n=3 Tax=Hypocreomycetidae TaxID=222543 RepID=C7YKC6_NECH7
RFC2_YEAST51.829%3287.47e-118Replication factor C subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RFC2 PE=1 SV=1
A0A1D8PQP2_CANAL51.045%3353.29e-117Replication factor C subunit 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RFC2 PE=4 SV=1
Q6C6B9_YARLI52.454%3261.48e-113YALI0E10747p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E10747g PE=4 SV=1
A0A1E4TLQ1_9ASCO49.679%3128.12e-101Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_90613 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0373

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 332

Detailed signature matches

  1. Domain IPR003959
    ATPase, AAA-type, core
    1. PF00004 (AAA)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR003593
    AAA+ ATPase domain
    1. SM00382 (AAA_5)
  4. Domain IPR008921
    DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
    1. SSF48019 (post-AAA+...)
  5. Domain IPR013748
    Replication factor C, C-terminal
    1. PF08542 (Rep_fac_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.8.60
  2. G3DSA:1.20.27...
  3. G3DSA:3.40.50...
  4. cd00009 (AAA)

Residue annotation

  1. Walker A motif cd0...
  2. ATP binding site c...
  3. Walker B motif cd0...
  4. arginine finger cd...

Protein sequence

>MIA_05624_1
MLFYGPPGTGKTSTILALAKDLFGPDLMKTRVLELNASDERGISIVREKVKNFAKIAISQASTAVREKYPCPPYKIVILD
EADSMTSDAQSALRRTMELYSDTTRFCLICNYVTRIIDPIASRCAKFRFKSLDETNALSRLKLIAQKESLKYDPEVLESL
LKISGGDLRKAITFLQSAARLTTSISDETIINTNSADQDGDIIMDEESKLLKASITVKMIEEIAGVIPDDVIDSIVTSCA
PERPTSNLGNSDSQVFKNVLDLTEKLMLDGWSATQIIAQLHNRIICDDSYSSSQKIDFSCALSEADKRLTDGTDEYLEML
NILTKLTRSLSN

GO term prediction

Biological Process

GO:0006260 DNA replication

Molecular Function

GO:0003677 DNA binding
GO:0005524 ATP binding

Cellular Component

None predicted.