Protein
MIA_05571_1
Length
720 amino acids
Browser: contig08:842866-845029+
Protein function
| EGGNOG: | 0PJN7 | FG04264.1 | transcription initiation factor IIF subunit alpha |
|---|---|---|---|
| SGD closest match: | S000003418 | TFG1 | Transcription initiation factor IIF subunit alpha |
| CGD closest match: | CAL0000187824 | TFG1 | Transcription factor IIF subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_02036_1 | 56.114% | 597 | 1.97e-163 | MCA_02036_1 |
| A0A0J9XIP5_GEOCN | 51.429% | 455 | 2.93e-115 | Similar to Saccharomyces cerevisiae YGR186W TFG1 TFIIF (Transcription Factor II) largest subunit, involved in both transcription initiation and elongation of RNA polymerase II OS=Geotrichum candidum GN=BN980_GECA20s00505g PE=4 SV=1 |
| UniRef50_A0A0J9XIP5 | 51.429% | 455 | 5.98e-112 | Similar to Saccharomyces cerevisiae YGR186W TFG1 TFIIF (Transcription Factor II) largest subunit, involved in both transcription initiation and elongation of RNA polymerase II n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XIP5_GEOCN |
| A0A1E3PMD4_9ASCO | 43.993% | 566 | 1.48e-102 | Rap30/74 interaction domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82364 PE=4 SV=1 |
| A0A167D3X1_9ASCO | 44.970% | 507 | 1.50e-101 | Transcription factor IIF subunit TFG1 OS=Sugiyamaella lignohabitans GN=TFG1 PE=4 SV=1 |
| Q6C1W7_YARLI | 39.691% | 582 | 2.81e-84 | YALI0F12815p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F12815g PE=4 SV=1 |
| A0A060TEF7_BLAAD | 47.253% | 273 | 7.72e-78 | ARAD1D14828p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D14828g PE=4 SV=1 |
| Q5AMR1_CANAL | 44.840% | 281 | 6.22e-71 | Transcription factor IIF subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TFG1 PE=4 SV=1 |
| A0A1E4TJV6_9ASCO | 38.172% | 372 | 2.19e-51 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_626 PE=4 SV=1 |
| T2FA_YEAST | 57.258% | 124 | 8.01e-40 | Transcription initiation factor IIF subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFG1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9806
Predicted cleavage: 22
Protein family membership
Domains and repeats
-
Domain
1
100
200
300
400
500
600
720
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_05571_1 MSNPLIQPKRRFARNADPLRRPSRPVIKKPAVGKPTATKQKLLPNSQPSTSILASAIVAGSDSLKPSDKTQYREYNLNAC NEDDIKDLRYHLMRFHSKTEVNPVGTFTKPIRLHRKDPRNMQNQLTLAELEERNKRLGITTSIPKHLLAEAAAAETKANS GDENIKTENGEPKTSDTANGKDDAKQKGKTTSEEADMSLIAPDGGARRGKSHLFQKKTKQVVLGDANARKLRYEEYYPWI LEDFDGKNTWVGNYEAGQTDAYVLFVFDNDGFKMVPAEKWYKMTPRNKYATLTSEEAEKQMEKGELPNRWVMKYFGNEEG ATTKHPTNMRRRFRTTDSNTVDEMRRDDDGNDIDFDEEFADDEEAPIMEGNEDEVKEVENKIKKEHQSAKISALFDEQEN EEEDEENRKVDKQGKHMIKYLRSREKNINYETDDDSNPYATEESSEEEEEIDNPASLGGAIKGPNGTEIKKEPGTEAIKT ESVTIKTEEGAEGTPAASVPGEEKPKKKLKDKKLKEKKKKKGLKKHHNLPRGMVILNLPPAKLAQFQSDLWNPGLKRRRA ELSDGEESGVKHKVKKLKTKDKSNAGGANKNTATATQASVHPTNSLVNNPAAANTAAAAPSTTNGQSTSPGNRLSTSPAA SAAEGSPSPVSGSTASNQVDLITEEEVKQVVRSQRLNAREILAVFKNRYRKKPENLKLLMQHLKHVAKINEGYLVLRDNV
GO term prediction
Biological Process
GO:0006367 transcription initiation from RNA polymerase II promoter
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter
Molecular Function
GO:0003677 DNA binding
GO:0003824 catalytic activity
Cellular Component
GO:0005634 nucleus