Protein
MIA_05568_1
Length
255 amino acids
Browser: contig08:835483-836377+
Protein function
| EGGNOG: | 0PI30 | SKI6 | exosome complex |
|---|---|---|---|
| SGD closest match: | S000003427 | SKI6 | Exosome complex component SKI6 |
| CGD closest match: | CAL0000180234 | orf19.4582 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_02039_2 | 75.102% | 245 | 7.02e-135 | MCA_02039_2 |
| A0A0J9XCA1_GEOCN | 65.833% | 240 | 1.02e-118 | Similar to Saccharomyces cerevisiae YGR195W SKI6 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA09s00142g PE=4 SV=1 |
| A0A1E3PMR7_9ASCO | 57.806% | 237 | 1.37e-104 | Ribosomal protein S5 domain 2-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_73883 PE=4 SV=1 |
| A0A060T9F2_BLAAD | 54.772% | 241 | 2.58e-103 | ARAD1D14872p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D14872g PE=4 SV=1 |
| Q5AMR4_CANAL | 59.833% | 239 | 3.35e-102 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4582 PE=4 SV=1 |
| Q6CA11_YARLI | 57.983% | 238 | 1.30e-100 | YALI0D06776p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D06776g PE=4 SV=1 |
| UniRef50_Q6BHJ0 | 55.967% | 243 | 1.60e-97 | DEHA2G18194p n=6 Tax=Ascomycota TaxID=4890 RepID=Q6BHJ0_DEBHA |
| RRP41_YEAST | 51.452% | 241 | 7.48e-91 | Exosome complex component SKI6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKI6 PE=1 SV=1 |
| A0A167D414_9ASCO | 57.386% | 176 | 2.63e-70 | Ski6p OS=Sugiyamaella lignohabitans GN=SKI6 PE=4 SV=1 |
| A0A1E4TM41_9ASCO | 48.133% | 241 | 6.16e-69 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_56317 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0298
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Domain
1
50
100
150
200
255
Detailed signature matches
no IPR
Unintegrated signatures
-
cd11370 (RNase_PH_R...)
Residue annotation
-
hexamer interface ...
-
Rrp4 interface cd1...
Protein sequence
>MIA_05568_1 MVCKYKGKSSRFELFSPEGLRIDGRRWNELRHFSCKINTHPNSADGSSYVEQGLTKVVCIAKGPHEPDGRNQTSSEGVFL NIDITVPPFSTTERKRRVRNDRRLQEMCICLRRLFQEAVLAHLYPRTVIDINLYVVAQDGGMLPACINAATLALIDAGIS MKDYVSGCSTAMYGDNPLLDPCHAEEQDVSFVNVGVIGKTSERLSLLLLENKMPLDRLEPAIALSLSGCQSIRSMMDAEV RRHGASRKSKTISLE
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.