Protein

MIA_05538_1

Length
378 amino acids


Browser: contig08:764898-766035+

Protein function

EGGNOG:0PGB1FG10280.1poly(A) RNA export protein
SGD closest match:S000000909GLE2Nucleoporin GLE2
CGD closest match:CAL0000190268GLE2RNA export factor

Protein alignments

%idAln lengthE-value
MCA_02070_159.312%3491.15e-159MCA_02070_1
A0A1E3PEE6_9ASCO55.833%3601.58e-146WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47629 PE=4 SV=1
A0A0J9XH51_GEOCN57.102%3521.50e-144Similar to Saccharomyces cerevisiae YER107C GLE2 Component of the Nup82 subcomplex of the nuclear pore complex OS=Geotrichum candidum GN=BN980_GECA16s01198g PE=4 SV=1
A0A167EU78_9ASCO58.358%3411.03e-143RNA export factor GLE2 OS=Sugiyamaella lignohabitans GN=GLE2 PE=4 SV=1
A0A1E4TBI1_9ASCO57.062%3542.27e-140Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3745 PE=4 SV=1
A0A060TA91_BLAAD54.467%3477.44e-137ARAD1B05544p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B05544g PE=4 SV=1
Q6C4W1_YARLI55.398%3522.45e-132YALI0E23265p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E23265g PE=4 SV=1
UniRef50_Q6C4W155.398%3525.67e-129YALI0E23265p n=26 Tax=Fungi TaxID=4751 RepID=Q6C4W1_YARLI
A0A1D8PQE5_CANAL49.864%3675.94e-132RNA export factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GLE2 PE=4 SV=1
GLE2_YEAST48.556%3812.34e-131Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLE2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1357

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 50 100 150 200 250 300 350 378

Detailed signature matches

    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MIA_05538_1
MSFFGQRNTSLGLGSSSSTSTQPSAAGVGNQNETSGDTILANGPEDSVSDLAFSPTADILSVASWDNKVRLYEVINGVGQ
GRAMYEHQAPVLSTHWASDGSKVASGGCDNAVRVYDLGTGQAAQVGAHDAPVKAVRFVSVPGGSTGAGPAGSSSILASAG
WDKTLKYWDLRAQQPIATVALPDRAYSMDASKSLLVVATAERHVVAFDLNNPQTIFKRSESVLKWQTRCVACFPQGDGYA
LGSIEGRCSIQYMDPRVHAQKGFTFKCHRKPVTSPRTESLVYAVNSVSFHPGYGTLATAGADGCFNFWDMENRYRRMSSL
DNGGPISATAFNASGSVFAYAVSYDWSKGYTHAGDFPNMVKFHAVLEDQVKPRPRGKR

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.