Protein
MCA_02070_1
Length
361 amino acids
Browser: contigB:149321-150407+
RNA-seq: read pairs 1190, FPKM 40.6, percentile rank 60.6% (100% = highest expression)
Protein function
| KEGG: | K14298 | RAE1 | mRNA export factor |
|---|---|---|---|
| EGGNOG: | 0PGB1 | FG10280.1 | poly(A) RNA export protein |
| SGD closest match: | S000000909 | GLE2 | Nucleoporin GLE2 |
| CGD closest match: | CAL0000190268 | GLE2 | RNA export factor |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XH51_GEOCN | 73.51% | 336 | 3e-173 | Similar to Saccharomyces cerevisiae YER107C GLE2 Component of the Nup82 subcomplex of the nuclear pore complex OS=Geotrichum candidum GN=BN980_GECA16s01198g PE=4 SV=1 |
| A0A1E3PEE6_9ASCO | 62.64% | 348 | 3e-154 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47629 PE=4 SV=1 |
| A0A167EU78_9ASCO | 63.82% | 340 | 3e-153 | RNA export factor GLE2 OS=Sugiyamaella lignohabitans GN=GLE2 PE=4 SV=1 |
| MIA_05538_1 | 59.89% | 349 | 3e-151 | MIA_05538_1 |
| A0A060TA91_BLAAD | 60.41% | 341 | 3e-149 | ARAD1B05544p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B05544g PE=4 SV=1 |
| A0A1E4TBI1_9ASCO | 59.59% | 339 | 2e-147 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3745 PE=4 SV=1 |
| GLE2_YEAST | 56.85% | 343 | 2e-134 | Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GLE2 PE=1 SV=1 |
| UniRef50_P40066 | 56.85% | 343 | 6e-131 | Nucleoporin GLE2 n=80 Tax=Saccharomycetales TaxID=4892 RepID=GLE2_YEAST |
| A0A1D8PQE5_CANAL | 53.61% | 360 | 2e-132 | RNA export factor OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GLE2 PE=4 SV=1 |
| Q6C4W1_YARLI | 56.76% | 340 | 2e-130 | YALI0E23265p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E23265g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0507
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
1
50
100
150
200
250
300
361
Detailed signature matches
-
-
PF12894 (ANAPC4_WD40)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_02070_1 MFGSSSSSTTTANNSTPTNSDLANDTTLSNPPDDSISDISFSPQADLLSVASWDNKVRIYELDGNGQSQGRAMFEHQAPV LSTRWSPDGTKVVSAGCDNAARLYDLQSGSASQVAMHDQPIRVVRYVDIPNANGPVIATASWDKTLKYWDLRQQQPISTV QLPERAYTMDTAKQLLVVGTAERHVCIFNLNNPTTIFQNTTSPLKWQTKCIACYPSGESYAITSIEGRCGIQYIDPNVSP HSSFSFKCHRQPVTSPRSETLVYSVNSICVHPIYGTLSTSGSDGSFHFWDTDSKHRLKAYPNAGSIITSTAFNKNGTIFA YALSYDWSKGYQHNNPQQYPNVVKFHPVNEEEVKPRQRIKK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.