Protein
MIA_05450_1
Length
196 amino acids
Browser: contig08:502791-503382-
Protein function
| EGGNOG: | 0PFTI | SSU72 | Processively dephosphorylates Ser-5 of the heptad repeats YSPTSPS in the C-terminal domain of the largest RNA polymerase II subunit (rpb1) (By similarity) |
|---|---|---|---|
| SGD closest match: | S000005166 | SSU72 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 |
| CGD closest match: | CAL0000174970 | SSU72 | RNA polymerase II subunit A C-terminal domain phosphatase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00736_1 | 76.020% | 196 | 2.45e-118 | MCA_00736_1 |
| SSU72_YARLI | 65.969% | 191 | 2.66e-102 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SSU72 PE=3 SV=1 |
| A0A1E3PHG7_9ASCO | 67.016% | 191 | 1.35e-100 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51459 PE=4 SV=1 |
| A0A060SZU2_BLAAD | 66.327% | 196 | 1.44e-98 | ARAD1C06688p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C06688g PE=4 SV=1 |
| A0A0J9XGH9_GEOCN | 65.969% | 191 | 9.50e-97 | Similar to Saccharomyces cerevisiae YNL222W SSU72 Transcription/RNA-processing factor that associates with TFIIB and cleavage/polyadenylation factor Pta1p OS=Geotrichum candidum GN=BN980_GECA15s01165g PE=4 SV=1 |
| SSU72_YEAST | 60.199% | 201 | 2.64e-91 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSU72 PE=1 SV=1 |
| UniRef50_P53538 | 60.199% | 201 | 6.30e-88 | RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=74 Tax=Ascomycota TaxID=4890 RepID=SSU72_YEAST |
| A0A1E4TBQ6_9ASCO | 62.500% | 176 | 3.23e-85 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32511 PE=4 SV=1 |
| Q59UG2_CANAL | 47.748% | 222 | 9.07e-72 | RNA polymerase II subunit A C-terminal domain phosphatase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SSU72 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0343
Protein family membership
- RNA polymerase II subunit A (IPR006811)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MIA_05450_1 MSVNKDLRLCTVCASNQNRSMEAHRVLKQAGYSVESYGTGSAVRLPGSSIDRPNTYSFGTPYNTMYNDLSKKDMRLYTAN GVLMMLDRNRKIKDHPERWIEHKRIFDVVFTCEERCFDAVCYDLMNRGANINKLVHVINVEIKDNHEEAQVGARGILDLA NRFSEAEDLDTEIMGILTSWQDNHKNLPVLYSPAYF
GO term prediction
Biological Process
GO:0006397 mRNA processing
Molecular Function
GO:0004721 phosphoprotein phosphatase activity
Cellular Component
GO:0005634 nucleus