Protein
MIA_05439_1
Length
933 amino acids
Browser: contig08:465430-468327+
Protein function
| EGGNOG: | 0PFUU | SEN1 | tRNA-splicing endonuclease |
|---|---|---|---|
| SGD closest match: | S000004422 | SEN1 | Helicase SEN1 |
| CGD closest match: | CAL0000183795 | SEN1 | Putative DNA/RNA helicase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X8S5_GEOCN | 30.612% | 931 | 8.82e-117 | Similar to Saccharomyces cerevisiae YLR430W SEN1 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs OS=Geotrichum candidum GN=BN980_GECA06s00615g PE=4 SV=1 |
| UniRef50_A0A0J9X8S5 | 30.612% | 931 | 1.80e-113 | Similar to Saccharomyces cerevisiae YLR430W SEN1 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8S5_GEOCN |
| MCA_03390_1 | 31.001% | 929 | 4.69e-112 | MCA_03390_1 |
| SEN1_YEAST | 31.626% | 898 | 2.35e-103 | Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 PE=1 SV=2 |
| Q5ANG6_CANAL | 28.939% | 895 | 2.86e-95 | Putative DNA/RNA helicase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEN1 PE=4 SV=1 |
| A0A1E3PFB1_9ASCO | 29.101% | 890 | 2.76e-92 | p-loop containing nucleoside triphosphate hydrolase protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7636 PE=4 SV=1 |
| A0A060TAU8_BLAAD | 35.120% | 541 | 3.97e-83 | ARAD1D26598p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D26598g PE=4 SV=1 |
| A0A167CSC4_9ASCO | 33.865% | 564 | 1.80e-78 | Putative DNA/RNA helicase SEN1 OS=Sugiyamaella lignohabitans GN=SEN1 PE=4 SV=1 |
| W0TYQ4_YARLI | 32.887% | 523 | 6.42e-73 | YALI0A19404p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A19404g PE=4 SV=1 |
| A0A1E4THA5_9ASCO | 36.517% | 356 | 1.11e-66 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_12256 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0801
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
933
Detailed signature matches
-
-
SSF52540 (P-loop co...)
-
no IPR
Unintegrated signatures
-
-
-
PF13086 (AAA_11)
-
PF13087 (AAA_12)
-
mobidb-lite (disord...)
Protein sequence
>MIA_05439_1 MSSKNKELHNEILKWDYFCAADYPQKILPKFRNKQESPEPNSFGTLTKCSPLPDAFYSISEYMRAFLPLMRVECWAGISK SRFYLNEEEYFAIIPEKLKNEKIPQIAIQRVQEVTVSISAEDFKEYELSTSDVLLITFEDRIKSQDSGKQFEKQKYKYDY ALAIISNITTYQRQETSILFLKVILPFTDFEIFPQEIEPWNAIKLTTLLPVEREYSALHAFSTLKLRDQILKGIPSAVSE EWERGQESREFIRMIQKEHGLNRSQAEAVSGTQKVKGISLIQGPPGTGKTKTIVSMMGALLSYPDDDPNPPLIMGDKPPE RYYQISTLDNEKEDTIKKIITCSYVEIWMIDFLHSNLEEILKDLAREIVIITNKTNTNPRIRRILICTPSNKAVDEILFR VGSGMLGLCPGMEKKADKNIYPQVVRIGQSSAMKNNVKDYSLESVVKKQMGWCEKTIIKKFQAKIKERVRGNSTSINSLK KDKEKKEKELESNELSSSKQCEIREHIDELTVRINNYSAENRKLIYITEILARLCSESKSLETIKTKEVLQNSNIVCSTL SGSGQRNIASLNVSFPIVIIDEAAQAVEATSLIPLQYECEKCIMVGDPKQLPPTVLSRAASKNGYDRSLYVRMFEKKNTL VSAATLNEDQDSDEEGWNLDITNAGGRELRRRAVFQLTVQYRMHPQVASFPNQEFYKGMIEDGDDMGKSRRERWHDWRFV DPNGGPEPKGFLGPLHFFNLAEGKHETSPKRPSLCNMAEITFVLELYRNWRKWMGWQDVWGRVGIVTPYREQLFQFTKRF KEEFGEEVLNEVEITTVDGFQGQEKDIIIFSCVRAMDAGCEKKNRRKSFGGGVGFLGDPRRMNVAMTRARCSLWVVGHEQ TLRTDAMWGRFCTHVQKQGVSVKVGEDFFGNLRRADQDGMDVVEEQLRFLDLE
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.