Protein
MIA_05361_1
Length
544 amino acids
Browser: contig08:267149-268784+
Protein function
| EGGNOG: | 0PHY2 | PGUG_00412 | nuclear mRNA surveillance of mRNP export |
|---|---|---|---|
| SGD closest match: | S000005692 | SWT1 | Transcriptional protein SWT1 |
| CGD closest match: | CAL0000200967 | orf19.7059 | mRNA-processing endoribonuclease |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_02941_1 | 35.815% | 497 | 1.73e-78 | MCA_02941_1 |
| A0A060TBY3_BLAAD | 52.258% | 155 | 5.69e-46 | ARAD1B12408p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B12408g PE=4 SV=1 |
| UniRef50_A0A060TBY3 | 52.258% | 155 | 1.40e-42 | ARAD1B12408p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TBY3_BLAAD |
| Q6CAS9_YARLI | 44.172% | 163 | 6.03e-40 | YALI0D00253p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D00253g PE=4 SV=1 |
| SWT1_YEAST | 44.444% | 162 | 1.28e-38 | Transcriptional protein SWT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWT1 PE=1 SV=1 |
| A0A167D1L9_9ASCO | 47.333% | 150 | 2.62e-36 | Swt1p OS=Sugiyamaella lignohabitans GN=SWT1 PE=4 SV=1 |
| A0A1D8PQL9_CANAL | 39.053% | 169 | 7.78e-34 | mRNA-processing endoribonuclease OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7059 PE=4 SV=1 |
| A0A0J9XKA4_GEOCN | 39.881% | 168 | 4.48e-32 | Similar to Saccharomyces cerevisiae YOR166C SWT1 RNA endoribonuclease involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs OS=Geotrichum candidum GN=BN980_GECA26s00175g PE=4 SV=1 |
| A0A1E3PCP6_9ASCO | 36.923% | 195 | 1.57e-29 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53790 PE=4 SV=1 |
| A0A1E4TBJ9_9ASCO | 38.415% | 164 | 2.48e-24 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_134077 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.6746
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
500
544
Detailed signature matches
-
-
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SSF88723 (PIN domai...)
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no IPR
Unintegrated signatures
-
cd09880 (PIN_Smg5-S...)
-
mobidb-lite (disord...)
Residue annotation
-
putative active si...
Protein sequence
>MIA_05361_1 MSFARRPKYKVEDILNDTIPEPLPPLPHHQHGLRSFPDDPSAESSAVKVGENAHLIPEAPMLKTAYSALIIDTNFILSHL DLIEDLRGLAEAYNHIIVIPWVVVEELDSLKSQNRKELGSTSSVGYLARKATDWIYKKLAACDSRVVGQKINQRLDSSLH GDDSILDCCLFFQQEYLLLTVIVSNDRNLCNKSLMHNIKTVTYRRGLTAKEISETVAREVINWQEQVNEVHEKFEKRKMK EFFADKDATADLQKYFEDMSDDENEPKQTEIQEDIEMDVDEPIKPVESSVAKPSGLLKSRYNHQPLPSPSKVVSSSQKPA GPVPFPADIDTHNPVVRQQLTLLHENISRFVVAHDADGLRDFYVQKIIDEVSPIMCKLILERFPNPADLRYMTGTQTLEK LFTTKSASTFHKDEFVYDSSVVYKFRSIDTMILMVSDFYSTVFRGRIPCENQGSDHIDKYKYMEPGFLRDSPSEHKKKLF VKDMKMFIFHWTELWGGLEVSELQKHQVTSPQDLSRMQGLMQDVEQYILGTRKLMVSGLEKVMQ
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.