Protein
MCA_02941_1
Length
608 amino acids
Browser: contigB:2857020-2858847+
RNA-seq: read pairs 410, FPKM 8.3, percentile rank 23.0% (100% = highest expression)
Protein function
| EGGNOG: | 0PHY2 | PGUG_00412 | nuclear mRNA surveillance of mRNP export |
|---|---|---|---|
| SGD closest match: | S000005692 | SWT1 | Transcriptional protein SWT1 |
| CGD closest match: | CAL0000200967 | orf19.7059 | mRNA-processing endoribonuclease |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05361_1 | 49.81% | 257 | 5e-75 | MIA_05361_1 |
| A0A060TBY3_BLAAD | 47.67% | 172 | 1e-46 | ARAD1B12408p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B12408g PE=4 SV=1 |
| UniRef50_A0A060TBY3 | 47.67% | 172 | 3e-43 | ARAD1B12408p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TBY3_BLAAD |
| Q6CAS9_YARLI | 39.88% | 168 | 2e-39 | YALI0D00253p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D00253g PE=4 SV=1 |
| SWT1_YEAST | 39.15% | 212 | 4e-38 | Transcriptional protein SWT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWT1 PE=1 SV=1 |
| A0A1D8PQL9_CANAL | 41.44% | 181 | 4e-37 | mRNA-processing endoribonuclease OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7059 PE=4 SV=1 |
| A0A167D1L9_9ASCO | 33.98% | 256 | 8e-35 | Swt1p OS=Sugiyamaella lignohabitans GN=SWT1 PE=4 SV=1 |
| A0A0J9XKA4_GEOCN | 35.05% | 214 | 6e-31 | Similar to Saccharomyces cerevisiae YOR166C SWT1 RNA endoribonuclease involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs OS=Geotrichum candidum GN=BN980_GECA26s00175g PE=4 SV=1 |
| A0A1E3PCP6_9ASCO | 32.24% | 214 | 4e-22 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53790 PE=4 SV=1 |
| A0A1E4TBJ9_9ASCO | 31.25% | 176 | 6e-20 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_134077 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1818
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
608
Detailed signature matches
-
-
-
SSF88723 (PIN domai...)
-
no IPR
Unintegrated signatures
-
cd09880 (PIN_Smg5-S...)
-
mobidb-lite (disord...)
Residue annotation
-
putative active si...
Protein sequence
>MCA_02941_1 MHYKKRQKYTLKDILNNDTLSPKRSEESVSSISNVIRKQRDSDLLDDYASSPDESSPHENGHRKSRLVPELPMLQNANAA LVVDTNFMLTHLDIVEELKELAEQYNQVIVIPWIVVQELDGLKSSTRKNYHRSSSASSSNSSSGEDTITTETIGFLARKA TAWIYQVFAQRDSRVVGQKLTQRIDKNLRGDDSILDCCLYFQEEYLLLTIILSNDRNMCNKSLVHNIKTVTFTKSLTAKQ ISEMVQAEVPEWQHQINIQQIKLAEKLKAKEQELEYMKKYVNGDAEQDENMIDLPSEKPQNHPPLKPNTKIHEEELEEMD QDDPPLPSPPPILTSTSHFKTQSSQAHALLNPLQKDLLHALTPGSENLSYLTNLITNRMIEEISPVIYKILTASLPESAI CRALEIKQLKTLVTTTPPTPNNKSSKVDEPQLNPNGPRYFKSIQAIMIVLNTFYEPVFEKYIGSVLKHAAAQSSNGSSST SSLSSSHRKSPSSAHHQKKSSSSTLKSPSSPISTKYNEPGDLVLRSSFSRKQTMTKKIEQCESIIKFIDLWTPIWKALEL GYLKSQNKTADKKYSDFLETEIVNYVTDIHDLLKESVAYLKKYLEHQI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.