Protein
MIA_05323_1
Length
1,115 amino acids
Browser: contig08:144197-147657-
Protein function
EGGNOG: | 0PH7G | PGUG_00058 | Splicing factor 3B subunit 1 |
---|---|---|---|
SGD closest match: | S000004901 | HSH155 | U2 snRNP component HSH155 |
CGD closest match: | CAL0000190260 | orf19.2675 | mRNA-binding U2 snRNP complex subunit |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MCA_02560_1 | 74.425% | 1130 | 0.0 | MCA_02560_1 |
A0A0J9XA94_GEOCN | 69.596% | 1115 | 0.0 | Similar to Saccharomyces cerevisiae YMR288W HSH155 U2-snRNP associated splicing factor OS=Geotrichum candidum GN=BN980_GECA07s00175g PE=4 SV=1 |
A0A060TC98_BLAAD | 70.686% | 1078 | 0.0 | ARAD1B15092p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B15092g PE=4 SV=1 |
A0A161HK89_9ASCO | 70.360% | 1083 | 0.0 | Hsh155p OS=Sugiyamaella lignohabitans GN=HSH155 PE=4 SV=1 |
UniRef50_A0A1D2JJ45 | 62.296% | 1228 | 0.0 | Uncharacterized protein n=1 Tax=Paracoccidioides brasiliensis TaxID=121759 RepID=A0A1D2JJ45_PARBR |
A0A1E3PPT0_9ASCO | 65.260% | 1114 | 0.0 | ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49372 PE=4 SV=1 |
Q6CDW3_YARLI | 60.529% | 1135 | 0.0 | YALI0B20724p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B20724g PE=4 SV=1 |
A0A1E4TCU6_9ASCO | 58.221% | 888 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_140918 PE=4 SV=1 |
SF3B1_YEAST | 56.328% | 877 | 0.0 | U2 snRNP component HSH155 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSH155 PE=1 SV=1 |
Q5AFD2_CANAL | 48.829% | 1110 | 0.0 | mRNA-binding U2 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2675 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0291
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
1
200
400
600
800
1000
1115
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_05323_1 MSDSEYEDIRRLKEARKSMQHRDESPEAIINYLEHEQSLQPVSKSSNPRSLVGQYTATSNMLSEVVANDDFDPLADRGKK KTIAARENEYVKRKYNRGLEEQYGNEDLSYEKAMELRQLEREEREVQELIRKKNMQLNDKEDDSQTHKKRRWDSRENESK ALENKEPPKRSRWDVQTEDTLAKPKRSRWDQAPAPPPPQKQVDAVQTTLTDEFLDSILPSEGYEILEPPINYMPLGSSAK NFTAPTESDGFIMLEDNSLKGLAMSKALPTEIPGVGDLQYFKENDMKYFGKLLDQENDTYLSVEELKERKVMRLLLKIKN GTPPVRKSALRHITDNARAFGPKVLFNQILPLLMEQSLEDQERHLLVKVIDRVLYKLGDLVRPYTHKILVVIEPLLIDED YFARIEGREIISNLSKAAGLAHMISTMRPDIDHADEFVRNTTARSFAVVASALGIPSLIPFIKAVCRSKKSWEARHTGIK IVQQIALFSGCAVLPHLTSLVECIAGGLSDEQNKVRMIAALALSSLAEASAPYGIESFDPVLEPLWRGIRHHRGKNLAAF LKCIGCIIPLMDPEHANYYTREVMVILLREYTTSDDEMKKIVLKVTQQCSATEGVTPQYLRQEVLPLFFKNFWVRRIALD RRSYKLVVETTMELAHKVGVSEILERIVDVLKDESEPYRKMGVETIDKVVGELGAADISERLEMRLIDGILTAFQEQTVE DSVLLNGFGTTVNALGGRTKAYIPQIVSAILFRLNHQSPTVRQQAADLITKIAVVMKQCNEDALLGKLGSILYEQLGEEY PEVLGSILGALGSIVNVIGLSSMQPPIRDLLPRLTPILRNRHEKVQENTIDLVGRIADRGAEYVSSREWMRICFELLDLL KAHKKGIRRAANNTFGYIAKAIGPQDVLATLLSNLRVQERQSRVCTAVAIGIVAETCAPFTVLPALMNEYRVPEMNVQNG VLKSMTFMFEYIGDMAKDYIYAVSTLLEDALVDRDQVHRQTAATVVKHLALGCIGLGYEDAMIHLLDLLFPNIFETSPHV IDRILDGIEGIRNAAGTGLVMNYVWAGLFHAARKVRTPYWRIYNTAYVQSADAMVPYYPELRKEQYHREELDIWI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.