Protein
MIA_05291_1
Length
654 amino acids
Browser: contig08:54952-56917-
Protein function
| EGGNOG: | 0PI0I | FG05165.1 | RNA splicing factor Pad-1 |
|---|---|---|---|
| SGD closest match: | S000001128 | NAM8 | Protein NAM8 |
| CGD closest match: | CAL0000195952 | PAB1 | Polyadenylate-binding protein, cytoplasmic and nuclear |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X7A9_GEOCN | 47.404% | 443 | 5.63e-118 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s03343g PE=4 SV=1 |
| MCA_02565_1 | 46.903% | 452 | 5.06e-113 | MCA_02565_1 |
| UniRef50_A0A0F7VIA1 | 43.333% | 450 | 3.14e-103 | Putative RNA splicing factor n=46 Tax=Fungi TaxID=4751 RepID=A0A0F7VIA1_9EURO |
| A0A1E3PEN7_9ASCO | 38.389% | 422 | 1.21e-76 | Splicing factor, CC1-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48217 PE=4 SV=1 |
| A0A161HHQ6_9ASCO | 33.784% | 370 | 1.99e-43 | Polyadenylate-binding protein OS=Sugiyamaella lignohabitans GN=PAB1 PE=4 SV=1 |
| Q6C4U4_YARLI | 42.439% | 205 | 3.25e-41 | YALI0E23628p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E23628g PE=4 SV=1 |
| A0A060T5C0_BLAAD | 41.667% | 204 | 5.79e-38 | ARAD1C10802p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C10802g PE=4 SV=1 |
| NAM8_YEAST | 25.333% | 225 | 5.90e-10 | Protein NAM8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM8 PE=1 SV=2 |
| PABP_CANAL | 41.096% | 73 | 1.17e-09 | Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PAB1 PE=3 SV=1 |
| A0A1E4TL65_9ASCO | 40.845% | 71 | 3.06e-09 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_87448 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0120
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
654
Detailed signature matches
-
-
PF15519 (RBM39linker)
-
no IPR
Unintegrated signatures
-
-
cd12283 (RRM1_RBM39...)
-
cd12285 (RRM3_RBM39...)
-
mobidb-lite (disord...)
Protein sequence
>MIA_05291_1 MSQVSQDLPAPNPSPPEPQGEPSSETAAVEPAATVSFSLDQSSKQQQSTVTSLTSSSSSSSSASAGPSSRKDRDRSTDSR HSSSSHSSSRRNHRSSSADGRSDTEEHSSSSRHRRSEHSSRHSSSRHSRDRTRSPRSSHRRERDSDRYRDRDHDRDHDRD RDHDRDRDRDRDRDRDRDRDRDRDRYRDRDRDRRRNDRRSRSPPRSRAETLAERDRRTVFVQQLAARLRTRDLFDFFEKA GPVRDASIVKDKMSRRSKGVGYVEFRHAESVPRAIDMSGEKLLGIPIIVQYTEAEKNRQQQQQQQQQSHIPSSLSSLSIT DGAASPSLHEDLTGASGAPTGPVESRIYVGNIHFGATEVELKQLFEPFGSINFIQLQRDPAGKSKGYAFVQYYDTASAVK ARSQMQGVMFAGRTLRVGMGGGSSSSSSLAHATPSSSSSVGSSLGNGYQGQAFTGSAFQNNGPAIDRVGGANVVGASSAS LLDDADVAGISYSKVSRENLMRKLMRNEDNFGPHVEQQQSSKLPSSLPPPPPPPSSINNSTGGAGASAAARKASRCIVVQ NMFDATQESGDSWVRELEDEVRSELEQEYGHVVHLSVDAASGTKGEVYIKFADLESSEKAIRGLSGRFFDGKQLIAQPVI DLVYSLKFPKSKDL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.