Protein

MIA_05239_1

Length
439 amino acids

Browser: contig07:1103338-1104658-

Protein function

EGGNOG:0PJH6CWC25pre-mRNA-splicing factor CWC25
SGD closest match:S000005189CWC25Pre-mRNA-splicing factor CWC25
CGD closest match:CAL0000183063CWC25Pre-mRNA-splicing factor CWC25

Protein alignments

%idAln lengthE-value
MCA_04796_164.474%1528.36e-46MCA_04796_1
A0A0J9X8H9_GEOCN60.811%1483.55e-35Similar to Saccharomyces cerevisiae YNL245C CWC25 Splicing factor required for the first step of pre-mRNA splicing] OS=Geotrichum candidum GN=BN980_GECA05s02705g PE=4 SV=1
UniRef50_A0A0J9X8H960.811%1487.26e-32Similar to Saccharomyces cerevisiae YNL245C CWC25 Splicing factor required for the first step of pre-mRNA splicing] n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8H9_GEOCN
A0A060TD76_BLAAD53.378%1483.15e-28ARAD1B22374p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B22374g PE=4 SV=1
A0A167DIU0_9ASCO50.000%1562.60e-26Cwc25p OS=Sugiyamaella lignohabitans GN=CWC25 PE=4 SV=1
CWC25_YARLI48.052%1549.34e-24Pre-mRNA-splicing factor CWC25 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC25 PE=3 SV=1
A0A1E3PEB2_9ASCO43.023%1724.34e-22Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84445 PE=4 SV=1
CWC25_CANAL44.444%814.50e-09Pre-mRNA-splicing factor CWC25 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC25 PE=3 SV=2
CWC25_YEAST34.586%1338.46e-09Pre-mRNA-splicing factor CWC25 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC25 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5999

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 439

Detailed signature matches

  1. Family IPR022209
    Pre-mRNA splicing factor
    1. PF12542 (CWC25)
  2. Domain IPR019339
    CBF1-interacting co-repressor CIR, N-terminal domain
    1. SM01083 (Cir_N_3)
    2. PF10197 (Cir_N)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MIA_05239_1
MPGNLNVKKSWHPGLLKNQAAVWQREQDALAERKKILERQKEIRQERERNELLALQEAATGQKRVQRMEWMYSGVSSGGS
GGGRAEEEEAEDYLLGKRRIDEMFRREEEENSVKRDKVAERFAAVGEDKEDVVKDMGKKDREDPMAAIMMRQQQQQRPGG
VSGDKPRRPLRQESKESFSTSSSSKRHEESGSRRREDSRSRYDEDSSSRRRQHESRRSRRDDSTSRERGGYSSRRRDRDS
RSQSPRDRKGHVRRDRGEEDESHDYRGSSSPRRGRRHNTTSRRDRSTSPRRRPHKHDDYYSRGSGRGSGNGHSKSGSSLR
DSPSPPPDKNRSLKSSRGGRGRDDYEDYEDDEGYRRHRRNDQQSVKSGRSNGMTEEERERRLREMQEDARVMEHERVLRV
DAARAQDKEEEQRDARQRVKNGASHSKFLTSTRSRFLDR

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.