Protein

MCA_04796_1

Length
446 amino acids

Gene name: CWC25

Description: Pre-mRNA-splicing factor CWC25

Browser: contigC:4080630-4081971-

RNA-seq: read pairs 650, FPKM 18.0, percentile rank 38.4% (100% = highest expression)

Protein function

Annotation:CWC25Pre-mRNA-splicing factor CWC25
EGGNOG:0PJH6CWC25pre-mRNA-splicing factor CWC25
SGD closest match:S000005189CWC25Pre-mRNA-splicing factor CWC25
CGD closest match:CAL0000183063CWC25Pre-mRNA-splicing factor CWC25

Protein alignments

%idAln lengthE-value
MIA_05239_164.47%1521e-40MIA_05239_1
A0A0J9X8H9_GEOCN50.98%1533e-33Similar to Saccharomyces cerevisiae YNL245C CWC25 Splicing factor required for the first step of pre-mRNA splicing] OS=Geotrichum candidum GN=BN980_GECA05s02705g PE=4 SV=1
UniRef50_A0A0J9X8H950.98%1537e-30Similar to Saccharomyces cerevisiae YNL245C CWC25 Splicing factor required for the first step of pre-mRNA splicing] n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8H9_GEOCN
A0A1E3PEB2_9ASCO56.52%1159e-25Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84445 PE=4 SV=1
A0A167DIU0_9ASCO46.79%1564e-25Cwc25p OS=Sugiyamaella lignohabitans GN=CWC25 PE=4 SV=1
A0A060TD76_BLAAD49.68%1553e-25ARAD1B22374p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B22374g PE=4 SV=1
CWC25_YARLI45.16%1556e-21Pre-mRNA-splicing factor CWC25 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC25 PE=3 SV=1
CWC25_CANAL32.93%1642e-08Pre-mRNA-splicing factor CWC25 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC25 PE=3 SV=2
CWC25_YEAST39.66%1162e-07Pre-mRNA-splicing factor CWC25 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC25 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8503

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 446

Detailed signature matches

  1. Family IPR022209
    Pre-mRNA splicing factor
    1. PF12542 (CWC25)
  2. Domain IPR019339
    CBF1-interacting co-repressor CIR, N-terminal domain
    1. PF10197 (Cir_N)
    2. SM01083 (Cir_N_3)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_04796_1
MPGNLNVKKSWHPGLLKNQVKVWQREQDAIAERKKILERKKEIQREKELNELMALQEANTGQKQVKRMEWMYSGVSSSAG
DRKDDDEDQNEDFLLGKRRIDDMYIKQEADTLKRDLVAERFKAEDGESENISVKTLKDEKKKESDDPMAAILTRQHTFSQ
LKKKQKEEKKKTKSIKTEEKYEKEVYDDTRRKSSSSSRRDRSPHSSRNYEKEEFKNQDHNKSFKKESSSSSRSRRYEERE
EEYDRYRRSDERARSSRRESSRERRSDDSRRRRSDSYEKDRHYSRRERYDDDDDDDYYRRDRHESSSHRRRRRHDDSYSE
DEREESYRRSKSIRHRSSSPHRRHSSRSPQRHRSETSKSSSYTRHSESNNKSLPLSDTKNKTDAEERERKLKEMMDNAKE
VEKSRKERIESAKEKDSEMNSFSKSRRRQDEPLEFVHNSKKKLLGL

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.