Protein

MIA_05202_1

Length
558 amino acids

Browser: contig07:1013331-1015068-

Protein function

EGGNOG:0PGZVFG00449.1periodic tryptophan protein
SGD closest match:S000004186PWP1Periodic tryptophan protein 1
CGD closest match:CAL0000198308PWP1rRNA-processing protein

Protein alignments

%idAln lengthE-value
A0A0J9XCD8_GEOCN67.202%4360.0Similar to Saccharomyces cerevisiae YLR196W PWP1 Protein with WD-40 repeats involved in rRNA processing OS=Geotrichum candidum GN=BN980_GECA09s02276g PE=4 SV=1
MCA_00985_164.108%4430.0MCA_00985_1
A0A060T3J3_BLAAD58.019%4249.51e-161ARAD1C37752p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37752g PE=4 SV=1
A0A167ECF3_9ASCO56.977%4302.22e-161Pwp1p OS=Sugiyamaella lignohabitans GN=PWP1 PE=4 SV=1
UniRef50_A0A167ECF356.977%4306.09e-158Pwp1p n=12 Tax=saccharomyceta TaxID=716545 RepID=A0A167ECF3_9ASCO
A0A1E3PS04_9ASCO52.620%4395.06e-147WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81244 PE=4 SV=1
Q6C7G1_YARLI47.631%4011.52e-114YALI0E01100p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E01100g PE=4 SV=1
A0A1E4TJ33_9ASCO41.459%5219.00e-108Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_366 PE=4 SV=1
A0A1D8PLA3_CANAL40.292%4796.40e-100rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PWP1 PE=4 SV=1
PWP1_YEAST43.297%4554.24e-99Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PWP1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7668
Predicted cleavage: 22

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
  3. Repeat
1 100 200 300 400 500 558

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
  3. Repeat IPR001680
    WD40 repeat
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
  4. Repeat IPR020472
    G-protein beta WD-40 repeat
    1. PR00320 (GPROTEINBRPT)
  5. SITE IPR019775
    WD40 repeat, conserved site
    1. PS00678 (WD_REPEATS_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. NON_CYTOPLASM... (N...)
  3. SIGNAL_PEPTIDE (Sig...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. SIGNAL_PEPTID... (S...)
  7. mobidb-lite (disord...)

Protein sequence

>MIA_05202_1
MSLISATSWVPRGFASQLPVKYDFDDEEMDRLAGLARLQLEEAQEELEEEEEELADISNKEKISVLKKDEEDGDLALDED
LKEYDLEHYDDDDADKEDDGEGMAMFSNIKNLVYHENGEEDPYITLPSKEEEEEERREWEIYPTDNLILATKTEEEVSTL
EVYVYDDKALDGGEEDDEDEDGRHESNLYIHHDIMLPSFPLCVEWLDFRVGKAREDHVGPDGVVAPGNFAAVGTFEPEIE
LWNVDAVDSPLPDMILGAKPDDDNTVLTDADKQLKKKKKKKAIKKKINDQYHIDAVLALAANRVHRNLLVSGSADTTVKL
WDLNEGVCARSLRLHDDKVSAVRWNPEQGTVLLSGGFDRCAVVSDLRAAETESGRRSWSVESDIEGVKWDRDGVHFYVGT
ESGIVHKFDARVADQSVWKLQAHDAEVSTFDVNPHVDGFMVTGSSDKTIKLWDLSSAAEGGKGPSMILSRDLDVGKVFSV
GFAPDREVLGHVVVAGASGKLKVWDSLSNRTVYERIGRKYNVQQRKKEKVAEAADDEDEEEEDDDDDEFAGNSSDEDV

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.