Protein
MCA_00985_1
Length
539 amino acids
Gene name: PWP1
Description: Periodic tryptophan protein 1
Browser: contigA:3131888-3133590+
RNA-seq: read pairs 2224, FPKM 50.9, percentile rank 65.8% (100% = highest expression)
Protein function
| Annotation: | PWP1 | Periodic tryptophan protein 1 | |
|---|---|---|---|
| KEGG: | K14791 | PWP1 | periodic tryptophan protein 1 |
| EGGNOG: | 0PGZV | FG00449.1 | periodic tryptophan protein |
| SGD closest match: | S000004186 | PWP1 | Periodic tryptophan protein 1 |
| CGD closest match: | CAL0000198308 | PWP1 | rRNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05202_1 | 63.28% | 542 | 0.0 | MIA_05202_1 |
| A0A0J9XCD8_GEOCN | 59.62% | 525 | 0.0 | Similar to Saccharomyces cerevisiae YLR196W PWP1 Protein with WD-40 repeats involved in rRNA processing OS=Geotrichum candidum GN=BN980_GECA09s02276g PE=4 SV=1 |
| A0A167ECF3_9ASCO | 52.46% | 549 | 6e-167 | Pwp1p OS=Sugiyamaella lignohabitans GN=PWP1 PE=4 SV=1 |
| UniRef50_A0A167ECF3 | 52.46% | 549 | 2e-163 | Pwp1p n=12 Tax=saccharomyceta TaxID=716545 RepID=A0A167ECF3_9ASCO |
| A0A060T3J3_BLAAD | 52.45% | 530 | 1e-162 | ARAD1C37752p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C37752g PE=4 SV=1 |
| A0A1E3PS04_9ASCO | 47.39% | 555 | 4e-141 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81244 PE=4 SV=1 |
| Q6C7G1_YARLI | 43.95% | 537 | 1e-111 | YALI0E01100p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E01100g PE=4 SV=1 |
| A0A1D8PLA3_CANAL | 39.70% | 539 | 9e-110 | rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PWP1 PE=4 SV=1 |
| A0A1E4TJ33_9ASCO | 43.27% | 513 | 1e-109 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_366 PE=4 SV=1 |
| PWP1_YEAST | 40.98% | 549 | 2e-105 | Periodic tryptophan protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PWP1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0953
Predicted cleavage: 15
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
450
500
539
Detailed signature matches
no IPR
Unintegrated signatures
-
-
NON_CYTOPLASM... (N...)
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SIGNAL_PEPTIDE (Sig...)
-
SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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mobidb-lite (disord...)
Protein sequence
>MCA_00985_1 MSVISATAWVPRGYASEYPIKYEFNDEELEHLSGMAQLQIKSAEEEMDDEEESEEKKEQIQSLKRDDEDGDLANDEDLKE YDLEHYDDDKEDSDGETLGIFSNVKNLVYHENGEDDAYVTLPNNGEDEKADEEEDEEEKEEWHIYPTDNLILTTKTEEEV SSLEVYVYDDQAEDKEDDEEEEVHKSSLYVHHDILLPSFPLCIEWLDYRVGKGRDESNPDKPGNYAAIGTFDPEIEIWNI DVVDSPIPDLILGQSQANDTDTVGSKKKKSKLNKKKINNQYHIDAVLSLSANRLHRNLLTSASADTTVKLWDLNRGVCAK SLQVHTDKVSSVEWNPEQATVLLSGGYDRKAIVCDLRLDQDAKGGQRKWSVESDIENVKWDKDGYNFYVGTEQGIVHKFD ARNEGKSVWKLQAHDSEISTFDINSNIDGLMITGSSDKTIKLWDLDNEKGPSMILSRNLDVGKVFSASFAPDFEVGGHIV VAGASGKVKVWDTMSNRTVYERIGKRSKKEIKPRKVEKIVEQDDDGSEEEDDEEFDEAD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.