Protein

MIA_05158_1

Length
274 amino acids

Browser: contig07:873216-874232+

Protein function

EGGNOG:0PFQ5SWD2WD repeat protein
SGD closest match:S000001501SWD2COMPASS component SWD2
CGD closest match:CAL0000198527SWD2WD-repeat containing protein

Protein alignments

%idAln lengthE-value
MCA_05826_173.305%2366.03e-130MCA_05826_1
A0A0J9XFA5_GEOCN62.025%2373.35e-106Similar to Saccharomyces cerevisiae YKL018W SWD2 Subunit of the COMPASS (Set1C) complex OS=Geotrichum candidum GN=BN980_GECA13s02419g PE=4 SV=1
A0A060SZ37_BLAAD56.962%2371.16e-93ARAD1C05500p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C05500g PE=4 SV=1
A0A167F7I9_9ASCO57.500%2401.32e-92Swd2p OS=Sugiyamaella lignohabitans GN=SWD2 PE=4 SV=1
UniRef50_A0A167F7I957.500%2403.62e-89Swd2p n=2 Tax=Trichomonascaceae TaxID=410830 RepID=A0A167F7I9_9ASCO
Q6C0W1_YARLI54.468%2356.08e-89YALI0F21263p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F21263g PE=4 SV=1
A0A1E3PE67_9ASCO52.340%2352.32e-87WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_71826 PE=4 SV=1
A0A1E4TEE3_9ASCO47.234%2354.21e-80Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_99912 PE=4 SV=1
Q59PV3_CANAL44.033%2438.36e-69WD-repeat containing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWD2 PE=4 SV=1
SWD2_YEAST38.197%2333.84e-53COMPASS component SWD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWD2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0015

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 50 100 150 200 274

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
  3. Repeat IPR001680
    WD40 repeat
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
  4. SITE IPR019775
    WD40 repeat, conserved site
    1. PS00678 (WD_REPEATS_1)

Protein sequence

>MIA_05158_1
MSDSKPGVLSTVPINTENMCSFRPSKNLNYHKNQAEINCIDFDDEGDLALTSATDESIQLYDMKQGKHRNTIYSKKYGVT
LAKFTHNRMNCIYASTKEDDTIRYLSLHDNSYIRYFRGHKGRVHSLEVSPLEDLVLSGSDDNTVRLWDLRSPTCQGLLNT
PAPSLVAFDPSAVLFCVASEKLNCLSLYDVRNFDKQPFSVFKLDTKNRSWQKVEFSNNGKTVLVSTSEDTHYLLDSFHGI
LVTLVSAKMEDLYFQDRAIKEFTYGIQINSLTMI

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.