Protein

MIA_05153_1

Length
1,018 amino acids

Browser: contig07:860021-863128-

Protein function

EGGNOG:0PHDRFG08910.1Nonsense-mediated mRNA decay protein
SGD closest match:S000003893NMD5Nonsense-mediated mRNA decay protein 5
CGD closest match:CAL0000193918NMD5Nmd5p

Protein alignments

%idAln lengthE-value
MCA_05822_171.350%9110.0MCA_05822_1
A0A0J9XC67_GEOCN61.078%10200.0Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin OS=Geotrichum candidum GN=BN980_GECA08s04718g PE=4 SV=1
UniRef50_A0A0J9YH7554.465%9070.0Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YH75_GEOCN
A0A060T437_BLAAD48.984%10330.0ARAD1A14058p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A14058g PE=4 SV=1
A0A1E3PE12_9ASCO48.880%10270.0ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53196 PE=4 SV=1
Q6C5P6_YARLI43.865%9210.0YALI0E16324p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E16324g PE=4 SV=1
A0A167DGX5_9ASCO47.170%7420.0Nmd5p OS=Sugiyamaella lignohabitans GN=NMD5 PE=4 SV=1
A0A1E4THG4_9ASCO34.273%9223.11e-174Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_121299 PE=4 SV=1
Q59SI4_CANAL35.071%9212.82e-172Nmd5p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NMD5 PE=4 SV=1
NMD5_YEAST32.804%9456.10e-164Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0173

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 900 1018

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR001494
    Importin-beta, N-terminal domain
    1. SM00913 (IBN_N_2)
    2. PS50166 (IMPORTIN_B_NT)
    3. PF03810 (IBN_N)
  4. Domain IPR013713
    Exportin/Importin, Cse1-like
    1. PF08506 (Cse1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MIA_05153_1
MDTNALHTCLEATLQADANIRMQAELDLKAAEKTPGFINACLDIVIEPRVSDAVKSAAAVYLKNKISKGWTPIHPKDALI
DEDEKPVFRDRIVPALIKSVPPSRQVLVKVLNIIVARDFPKKWPSLVNVTLNLFQSNDVETIRVGLICLLEICKYYRWTR
EEQQEFDTVIEATFDGVLGIGNSLVNENSATAGDMLRHVLKIYKCAIQQVLPERLQKPENLANWGNLMLSVIKKPLPEDV
MKLSEEDRELNPWVKCKKWAFANLYRLFYKYAAPRKIGSQSEKYAAFSNIFIANYVPEIIKAYFEQIELWIKKDIWLGNA
AIYNILAFLEECISYKETWVLLKPHTEIIVSHVVFPLLCTTDNDIDIFENDPNEYIHKNIDVYEESHTPDIAATNFLVTL
IRKRSRHTLNPLLTFVQGVVSAHQANPVDLELARQQEAALRIMGSIAHFVLSKKSPIADKMEPFIAQYVFPDFSSPHGFL
RARACEFLNNYADVKFESVDNISIAYQSVLSCLEDKYLPVQVEAALALQPMVSIEGVHASLSSKIPEVMTCLLDLTSKVD
IDAISGVIGEFVEVFSEQLTPFAVNLATRMCDQLLRLLGELVEQQNMDFENIDYDDTANEDKTMTVLGLLNTMSTLLLAL
DNARNVVIELENILKPVIQIIFSKKLSEFYADVFGLIENCTYCLKVISPTMWDLFFQMHSVFKDDALDYLSEIFPSIDNY
LQYGAEEIGRNDRLKDVLFDIFTTVMSENDRLGVEDRIIASSIAQKMLLSLYGHIDAFVPQILESTTYHLTNHVEKLKNR
RYLVSLLEVILASICYNPQATLKFLEAKNLTQDFFTQWFEKMESFSRVYDLKLVILAMLGLFRVPDNELPDSIRNNLGQI
SKGLVSVLKKFPEAVKNKEEMEKDFNVNGNFDGEDFYDQWDDGEDEDEADDDGDRQATTDYLEYLESQAPGTGVGFFEED
ELEEEPLTETVLDKMEPNVVVRDAFITIKTNDPARYNVLTGGYTPEEAQIFEQCVSSA

GO term prediction

Biological Process

GO:0006886 intracellular protein transport

Molecular Function

GO:0005488 binding
GO:0008536 Ran GTPase binding

Cellular Component

None predicted.