Protein
MCA_05822_1
Length
1,047 amino acids
Browser: contigD:2426252-2429680+
RNA-seq: read pairs 4202, FPKM 49.5, percentile rank 65.2% (100% = highest expression)
Protein function
| KEGG: | K20223 | IPO7 | importin-7 |
|---|---|---|---|
| EGGNOG: | 0PHDR | FG08910.1 | Nonsense-mediated mRNA decay protein |
| SGD closest match: | S000003893 | NMD5 | Nonsense-mediated mRNA decay protein 5 |
| CGD closest match: | CAL0000193918 | NMD5 | Nmd5p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05153_1 | 65.24% | 1050 | 0.0 | MIA_05153_1 |
| A0A0J9XC67_GEOCN | 59.79% | 1047 | 0.0 | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin OS=Geotrichum candidum GN=BN980_GECA08s04718g PE=4 SV=1 |
| UniRef50_A0A0J9YH75 | 54.55% | 913 | 0.0 | Similar to Saccharomyces cerevisiae YJR132W NMD5 Karyopherin n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YH75_GEOCN |
| A0A060T437_BLAAD | 49.09% | 1047 | 0.0 | ARAD1A14058p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A14058g PE=4 SV=1 |
| A0A1E3PE12_9ASCO | 50.49% | 913 | 0.0 | ARM repeat-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53196 PE=4 SV=1 |
| Q6C5P6_YARLI | 43.88% | 923 | 0.0 | YALI0E16324p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E16324g PE=4 SV=1 |
| A0A167DGX5_9ASCO | 48.21% | 753 | 0.0 | Nmd5p OS=Sugiyamaella lignohabitans GN=NMD5 PE=4 SV=1 |
| Q59SI4_CANAL | 35.57% | 911 | 4e-169 | Nmd5p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NMD5 PE=4 SV=1 |
| A0A1E4THG4_9ASCO | 33.81% | 914 | 2e-161 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_121299 PE=4 SV=1 |
| NMD5_YEAST | 34.16% | 890 | 3e-159 | Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0186
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
800
900
1047
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MCA_05822_1 MDTNVLHSCLEATLQADANTRMQAELQLKEAEKAPGFITSCLAIVVEPRVSDPVKSAAAVYLKNKISKGWSTTSDSSISE EEKPIFRQQIIPALIKSSHPSRQVLVKILNLIVAKEFPRVWPEFLNVTMDLFQKSNNDIDSIRVGLTCLLEICKYYRWTI KEQREGLDVVIDHTFPGVLTIGNSLVNENSNVAGEMLRDVLKIYKCVTYQALPERLQEPKEMNDWGSLMLSVVRKELPEE VLKLSEEDREHNPWVKCKKWALANLHRLFYRYATPRKISRSAEYTKFSALFINNYVPEILKVYFEQIDLWVQKKIWLGNA SLYNILAFFEECIPLKTTWVILKPHIDVIVTHVVFPLLCTSDNDLEIFESDPEEYIHKHIDVYEESPTPDVAATNFLVTL IKKRSKHTLNNLLSFVQTVVNRHLADVNDLQLAREQEAALRIMGSISHIVLSKKSPIADQMETFISQYVFPDLSSPHGFL RARACEFLNHYADVDFQNVDNISIAYRSVIACMEDENLPVQVEAALALQPMVRHDAVRSSLSQSIPEVMTRLLDLANKID IDAIAGIIGEFVEVFSEQLTPFAVDLARKMSDQLLRLLNELIEQQNIDFDTGAYDDNVNEEKTMTALGILNTMSTLLLAL DNAVAVVIELENILKPVIELIFNERLSEFYSEVFGLIENCTYCLKSISPTMWSLFVQMHIVFKEDAIDYLAEMFPSIDNY LQYGTKEISENQQFKDILYDIFDIVMSDTNNNLGSKDRSYACSIAQKMLLGLKGHIDDIVPQILKQTTSRLTNDEPEKLK NAGYLVNLLEVILASLCYNPRATLSFLENAQLTEHCFKLWFDNLDKFKRVYDLKLVVLAMLSLFSLPDEDLPNSIRSSLA QISKALVSVLKKYPEAVKHRMEVDIEFDKGIDPSASDMFYEEWNEEDDELELEGEDSVAGNNNATGAGSGTAQEYLDFLD AEAKSGAESAGMGEDLVNNAIINDYYSSDDLEEEPLSETILDTVDPNAAVKNFLLNLKESGSVRYQVLTGQFTQEEVAIL EAAMGSC
GO term prediction
Biological Process
GO:0006886 intracellular protein transport
Molecular Function
GO:0005488 binding
GO:0008536 Ran GTPase binding
Cellular Component
None predicted.