Protein
MIA_05091_1
Length
100 amino acids
Browser: contig07:696783-697144+
Protein function
| EGGNOG: | 0PQY0 | LSM5 | U6 snRNA-associated Sm-like protein LSm5 |
|---|---|---|---|
| SGD closest match: | S000000948 | LSM5 | U6 snRNA-associated Sm-like protein LSm5 |
| CGD closest match: | CAL0000192540 | orf19.7256 | RNA-binding protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_06232_1 | 64.000% | 100 | 3.34e-40 | MCA_06232_1 |
| UniRef50_C8VFR4 | 52.381% | 105 | 1.59e-30 | Small nuclear ribonucleoprotein (LSM5), putative (AFU_orthologue AFUA_7G04280) n=5 Tax=leotiomyceta TaxID=716546 RepID=C8VFR4_EMENI |
| A0A060TDE9_BLAAD | 56.977% | 86 | 5.45e-28 | ARAD1D43230p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D43230g PE=4 SV=1 |
| A0A0J9X5L6_GEOCN | 49.495% | 99 | 4.82e-27 | Similar to Saccharomyces cerevisiae YER146W LSM5 Lsm (Like Sm) protein OS=Geotrichum candidum GN=BN980_GECA03s02815g PE=4 SV=1 |
| A0A1E3PDU3_9ASCO | 61.017% | 59 | 2.44e-23 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_28183 PE=4 SV=1 |
| A0A1D8PFX4_CANAL | 51.389% | 72 | 6.26e-23 | RNA-binding protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7256 PE=4 SV=1 |
| Q6CEP6_YARLI | 51.351% | 74 | 1.39e-22 | YALI0B14058p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14058g PE=4 SV=1 |
| LSM5_YEAST | 45.122% | 82 | 9.78e-22 | U6 snRNA-associated Sm-like protein LSm5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LSM5 PE=1 SV=1 |
| A0A1E4TID2_9ASCO | 47.222% | 72 | 5.52e-20 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21604 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0854
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
10
20
30
40
50
60
70
80
90
100
100
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
oligomer interface...
-
Sm1 motif cd01732
-
putative RNA bindi...
-
Sm2 motif cd01732
Protein sequence
>MIA_05091_1 MSAEVESHIPSSLDAPAGPIDASLAPLLPLELVDKAIGARIWVVLRSNREFKGTLVGFDDYVNMVLENVTEYDVNGQVVA QLPKLLLNGTNVALIIPEDQ
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.