Protein

MIA_04857_1

Length
788 amino acids

Browser: contig07:9567-11951+

Protein function

EGGNOG:0QDZFReverse transcriptase (RNA-dependent DNA polymerase)
CGD closest match:CAL0000201372orf19.2372Uncharacterized protein

Protein alignments

%idAln lengthE-value
UniRef50_A5DXY547.904%5011.46e-145Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DXY5_LODEL
MCA_01665_138.710%4961.97e-101MCA_01665_1
A0A161HJI4_9ASCO29.697%4952.23e-59Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1
YCH4_YEAST38.380%2846.16e-63Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2
A0A1D8PR73_CANAL26.993%5521.44e-41Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2372 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8269
Predicted cleavage: 52

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 788

Detailed signature matches

  1. Domain IPR013103
    Reverse transcriptase, RNA-dependent DNA polymerase
    1. PF07727 (RVT_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF56672 (DNA/RNA p...)
  2. cd09272 (RNase_HI_R...)
  3. mobidb-lite (disord...)

Residue annotation

  1. active site cd09272
  2. RNA/DNA hybrid bin...

Protein sequence

>MIA_04857_1
MTTRSSASSTSGSTGSSPSPSLSSSPRSSSSLVVHKPRSVRRILPSSSAPLESPTLPSLPSSPILPSSDQDPSVSSPIGP
SQSDLLQVGSPAGESDNSGDSGISQRGGDIGFHPDVIASSPSPPSVELEIVPLDQEPPSSDLVKSLDQAGVSVDTKDDTQ
AILPKSRSRVVAVRLPSVTPAKRPSSHDFVAPPSKHRCDDSAKLAASSVVPAKRRAEEESISYRRLKSLRFEYDDVALLV
FTDPTTFEQAMSSEDAEFWLEACVLEMSSLNRNRTWDLVDLPPGRKAINSKWVFKIKRKADGSIERYKARLVCIGFSQVE
GIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFIVKGQESKVCHLNKSLYGLKQAP
LCWNEKIHGALVKLGFVRNESDYGVYTKGRGSAMVIIALYVDDLLIAGNSTQAIANTKSSLSSMFKMKDLGLVEQFLGMR
VKQSPYHITVDVSRYIVDMLEEFGMQNCSSVKTPLPTRDLSDFSESDAAADSSLYRSIIGKLIYAANCARPDLAVAVSFL
CRYMQNPKSMHMEAAKHTLRYLKGSAQLGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSP
ASSSVESEYMSLSDASKECFWINQLLSLCQIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHL
EYLDTQVMLADMFTKNLGRVKFETLRGLLGMKAVGDSATRGGVEHAMLSQTSACENCWEIMVDGLCLF

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.