Protein
MIA_04768_1
Length
452 amino acids
Browser: contig06:942031-943390-
Protein function
| EGGNOG: | 0PFZX | FG09275.1 | cell differentiation protein Rcd1 |
|---|---|---|---|
| SGD closest match: | S000005232 | CAF40 | Protein CAF40 |
| CGD closest match: | CAL0000188205 | orf19.7198 | CCR4-NOT core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03041_1 | 86.194% | 268 | 1.14e-170 | MCA_03041_1 |
| A0A0J9XF73_GEOCN | 83.209% | 268 | 6.70e-168 | Similar to Saccharomyces cerevisiae YNL288W CAF40 Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation OS=Geotrichum candidum GN=BN980_GECA14s00626g PE=4 SV=1 |
| A0A167CL68_9ASCO | 80.000% | 270 | 1.87e-158 | CCR4-NOT core subunit CAF40 OS=Sugiyamaella lignohabitans GN=CAF40 PE=4 SV=1 |
| A0A060TA30_BLAAD | 80.741% | 270 | 6.82e-157 | ARAD1D23980p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D23980g PE=4 SV=1 |
| Q6C319_YARLI | 78.358% | 268 | 2.83e-158 | YALI0F03344p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F03344g PE=4 SV=1 |
| UniRef50_W6MPZ9 | 76.030% | 267 | 1.00e-148 | Uncharacterized protein n=76 Tax=Fungi TaxID=4751 RepID=W6MPZ9_9ASCO |
| A0A1E3PN52_9ASCO | 77.154% | 267 | 1.97e-151 | Rcd1-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22927 PE=4 SV=1 |
| CAF40_YEAST | 66.543% | 269 | 1.46e-130 | Protein CAF40 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAF40 PE=1 SV=1 |
| A0A1D8PRG1_CANAL | 60.396% | 303 | 6.17e-130 | CCR4-NOT core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7198 PE=4 SV=1 |
| A0A1E4TKH2_9ASCO | 63.197% | 269 | 3.78e-125 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_22185 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0335
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
452
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
PF04078 (Rcd1)
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MIA_04768_1 MFNGQQQSQIYGLTRQQQQQPPPPLPPPQQQQQQPSQASSTNYNAMRSQYPQYPPHMPMGAGPMHQQQQQQQHVSQDGLM SYKQALLSNTNININNNKPNSGSASANALRQLINPGGASMYNTNNNNTSEQQQPQSLENKDVASGAQSTAIASGPAALTT TSSSNISSVAPQPNLATPPPPQTDDDKVFTWILELMHGPNSEQALFELGKKREQYDDLALILWHSFGVMTCLLQEIIYVY PLLSPPQLTSNASNRVCNALALLQCIASHDATRKPFLEAHIPLFLYPFLSTTPKSRSFEYLRLTSLGVIGALVKNDSPEV IQFLLSTEIIPLCLRIMESGTDLSKTVAIFILQKILMDDAGLEHICQTFERFSAVSNVLADMVKQLVESPTTRLLKHVVR CYLRLSDNMQARNQLKTVLPEPFRDATFSNTLKEDSATKRCLGQLLSNLSDP
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.