Protein
MIA_04754_1
Length
523 amino acids
Browser: contig06:902855-904427-
Protein function
| EGGNOG: | 0PJ6M | FG01055.1 | KH domain RNA binding protein |
|---|---|---|---|
| SGD closest match: | S000000437 | PBP2 | PAB1-binding protein 2 |
| CGD closest match: | CAL0000187269 | PBP2 | Pbp2p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X6Y3_GEOCN | 60.309% | 194 | 5.18e-73 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein OS=Geotrichum candidum GN=BN980_GECA04s05554g PE=4 SV=1 |
| UniRef50_A0A0J9X6Y3 | 60.309% | 194 | 1.06e-69 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6Y3_GEOCN |
| A0A060T016_BLAAD | 39.394% | 231 | 2.97e-53 | ARAD1C13222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C13222g PE=4 SV=1 |
| Q5A8H8_CANAL | 46.746% | 169 | 3.83e-50 | Pbp2p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PBP2 PE=4 SV=1 |
| MCA_05104_1 | 47.826% | 207 | 5.07e-50 | MCA_05104_1 |
| PBP2_YEAST | 42.529% | 174 | 1.84e-37 | PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP2 PE=1 SV=1 |
| A0A161HLH2_9ASCO | 28.947% | 190 | 5.99e-25 | Pbp2p OS=Sugiyamaella lignohabitans GN=PBP2 PE=4 SV=1 |
| A0A1E4TLY2_9ASCO | 28.824% | 170 | 2.11e-23 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_49013 PE=4 SV=1 |
| Q6CGM2_YARLI | 31.792% | 173 | 4.95e-22 | YALI0A18161p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18161g PE=4 SV=1 |
| A0A1E3PID2_9ASCO | 29.744% | 195 | 2.26e-22 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13724 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0391
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
523
Detailed signature matches
no IPR
Unintegrated signatures
-
PS50084 (KH_TYPE_1)
-
cd00105 (KH-I)
-
cd02396 (PCBP_like_KH)
-
mobidb-lite (disord...)
Residue annotation
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
-
nucleic acid bindi...
-
G-X-X-G motif cd00...
Protein sequence
>MIA_04754_1 MSKRRNSDSEEPDFKRPAVQIKHDENEIIDIDASDKSAVATSDQLIKPDQQTSSENTAAPATQEQSQFTSSSATTVNPTT GTDDGESVASTSEPRPTSRLNEEVEASSPIHLRLLVSSKEAVFIIGQHGNTISKIREESNVELKVSEHFQGIKERVVNIK GSCEHVSKAAALITRCLNDEPFDQASTSDAKVFTLKVLIPQALMGAIIGKGGSRFREIESVSAAKLKSREQLMPYSTDKI LQIQGVADAIHIAVYYVSTTCVAHHEYIRNNRPIFYNPKYAYQQKQRHRQNYYGSAPPNMLSQGGFTNQYLQTTPGSYGM DQRGAPTAAYYGYPTQNLQPYNPAAAAVAAAAAGPSRYAAPRPYTNGPPSMGAAMNVAAAAFGRPGGNITNQNLRNAQLV AQRAERGKELKQDVQIPNAYVGSVIGKGGMTINHMRQFSRANIKVNDPIPNSTERTVTVVGLPEANEMAISMINNVIESE KQKNRTRQFNKNGNDGNSGASTSGGLANDLGVDGSSEPVQNAS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.