Protein
MCA_05104_1
Length
500 amino acids
Browser: contigD:369919-371422+
RNA-seq: read pairs 3119, FPKM 76.9, percentile rank 74.6% (100% = highest expression)
Protein function
| KEGG: | K18738 | HEK | heterogeneous nuclear rnp K-like protein |
|---|---|---|---|
| EGGNOG: | 0PJ6M | FG01055.1 | KH domain RNA binding protein |
| SGD closest match: | S000000437 | PBP2 | PAB1-binding protein 2 |
| CGD closest match: | CAL0000187269 | PBP2 | Pbp2p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X6Y3_GEOCN | 53.07% | 179 | 2e-53 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein OS=Geotrichum candidum GN=BN980_GECA04s05554g PE=4 SV=1 |
| UniRef50_A0A0J9X6Y3 | 53.07% | 179 | 5e-50 | Similar to Saccharomyces cerevisiae YBR233W PBP2 RNA binding protein with similarity to mammalian heterogeneous nuclear RNP K protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6Y3_GEOCN |
| MIA_04754_1 | 51.40% | 179 | 5e-49 | MIA_04754_1 |
| A0A060T016_BLAAD | 46.24% | 173 | 1e-43 | ARAD1C13222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C13222g PE=4 SV=1 |
| Q5A8H8_CANAL | 40.00% | 175 | 2e-36 | Pbp2p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PBP2 PE=4 SV=1 |
| PBP2_YEAST | 31.94% | 191 | 4e-23 | PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PBP2 PE=1 SV=1 |
| A0A161HLH2_9ASCO | 27.61% | 373 | 3e-23 | Pbp2p OS=Sugiyamaella lignohabitans GN=PBP2 PE=4 SV=1 |
| Q6CBE7_YARLI | 29.78% | 178 | 3e-17 | YALI0C19558p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C19558g PE=4 SV=2 |
| A0A1E3PID2_9ASCO | 33.54% | 158 | 1e-13 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13724 PE=4 SV=1 |
| A0A1E4TLY2_9ASCO | 25.43% | 173 | 3e-12 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_49013 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1639
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
500
500
Detailed signature matches
no IPR
Unintegrated signatures
-
-
PS50084 (KH_TYPE_1)
-
cd00105 (KH-I)
-
cd02396 (PCBP_like_KH)
-
mobidb-lite (disord...)
Residue annotation
-
nucleic acid bindi...
-
G-X-X-G motif cd02...
-
nucleic acid bindi...
-
G-X-X-G motif cd00...
Protein sequence
>MCA_05104_1 MLKRKNSDSDDNSVKRTAIDNEGQPSTIESTTSTDSSSNNNNNNNKIDLLNGKKTENLTCEDLKSLVPPSAFIHLRILVS LGEAVTIIGKRGSKIPEITQDLVKLNVSKLVPGINQRVTNIKGSAEHVAGTTGRMIRTIQHMPLDVKTTLDANKYTLQVL MPQAMMGAMIGKGRSMFEQIEEASAAKLWATDYTLPNSTDRCLKITGVADAIHIAVYYVCINYIAHEKIFEHKRPIFYNP ASVIPHPMPEQFYPGAVPMQGNFGGGGYDPTGYMGNHNRGGGNMGMYYGGGGPHPPPIQAVQPYNANGVRFNPRGLNQQH HHNINNGRMINQFNLGGFSRQPITSNVSLRNAQIVAQNAERGKTLTQDVLIPNDFVGSVIGKGGAKINHLRQFSGCQIKV NDPIPNSKERKITLVGNPDANETAIYMINNIIEANKKRNRFRNDNNNNNNNNNNNTTTNNNNNNNNNNNNEESTNNEENK NDNDLKKENIYSEENSVLED
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.