Protein
MIA_04737_1
Length
320 amino acids
Browser: contig06:856036-857062+
Protein function
| EGGNOG: | 0PM0J | CSL4 | Exosome complex subunit Csl4 |
|---|---|---|---|
| SGD closest match: | S000005176 | CSL4 | Exosome complex component CSL4 |
| CGD closest match: | CAL0000197512 | orf19.1026 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XKY4_GEOCN | 46.273% | 322 | 1.05e-76 | Similar to Saccharomyces cerevisiae YNL232W CSL4 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA26s00516g PE=4 SV=1 |
| A0A1E3PRJ9_9ASCO | 38.558% | 319 | 2.93e-63 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_56369 PE=4 SV=1 |
| A0A060TD90_BLAAD | 38.558% | 319 | 7.69e-53 | ARAD1D46046p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D46046g PE=4 SV=1 |
| UniRef50_A0A060TD90 | 38.558% | 319 | 1.90e-49 | ARAD1D46046p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TD90_BLAAD |
| A0A167F9Q0_9ASCO | 71.951% | 82 | 9.15e-40 | Csl4p OS=Sugiyamaella lignohabitans GN=CSL4 PE=4 SV=1 |
| Q6CHR4_YARLI | 68.293% | 82 | 3.62e-34 | YALI0A05995p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A05995g PE=4 SV=1 |
| CSL4_YEAST | 66.667% | 84 | 1.33e-33 | Exosome complex component CSL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSL4 PE=1 SV=1 |
| A0A1D8PD51_CANAL | 58.824% | 85 | 1.57e-32 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1026 PE=4 SV=1 |
| MCA_05017_1 | 59.341% | 91 | 8.27e-30 | MCA_05017_1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1602
Protein family membership
- Exosome complex component CSL4 (IPR019495)
Domains and repeats
-
Domain
1
50
100
150
200
250
320
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MIA_04737_1 MAIPGYVIPGQIICPLFEKVDAPASPQVVRKYVPGHGVALAPAPGNPSTVTLAATLVGRVAVEPLAEDSAAPPAAAQKKP AVHAFRVSVHDKFYSPAVLLQYAQTPAARGAVPLTREGVDVLPAIGSVVLARVTKLALRQAAVEILAVEHVPAAVGPFQP ESVPVAAESGAGINGLRPATVAPLNVSSAAATEKAAALLGGAHGAEGPWARPAAPRALAARAAAAAGRRRSARGSGDVRM TERDKVRMLDSFRPGDIVRATVISLGDGTNYYLSTARNDLGVVLARSAAGERMYPVDWETMRAPRTGEVERRKCAKPFSA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
Cellular Component
GO:0000178 exosome (RNase complex)