Protein
MIA_04734_1
Length
1,059 amino acids
Browser: contig06:846493-849673+
Protein function
| EGGNOG: | 0PKWD | PGUG_04671 | protein required for cell viability |
|---|---|---|---|
| SGD closest match: | S000004797 | RTP1 | RNA polymerase II assembly factor RTP1 |
| CGD closest match: | CAL0000194737 | orf19.7159 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_04993_1 | 30.317% | 1326 | 3.72e-161 | MCA_04993_1 |
| A0A0J9XL36_GEOCN | 29.935% | 1069 | 8.55e-116 | Similar to Saccharomyces cerevisiae YMR185W RTP1 Protein required for the nuclear import and biogenesis of RNA pol II OS=Geotrichum candidum GN=BN980_GECA25s00967g PE=4 SV=1 |
| UniRef50_A0A0J9XL36 | 29.935% | 1069 | 1.75e-112 | Similar to Saccharomyces cerevisiae YMR185W RTP1 Protein required for the nuclear import and biogenesis of RNA pol II n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XL36_GEOCN |
| A0A167CHW3_9ASCO | 26.456% | 979 | 5.46e-82 | Rtp1p OS=Sugiyamaella lignohabitans GN=RTP1 PE=4 SV=1 |
| A0A1E3PMM7_9ASCO | 28.088% | 1004 | 1.75e-82 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50115 PE=4 SV=1 |
| A0A060T0R7_BLAAD | 31.818% | 506 | 1.59e-55 | ARAD1C15114p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C15114g PE=4 SV=1 |
| A0A1D8PRI9_CANAL | 21.405% | 598 | 5.49e-27 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7159 PE=4 SV=1 |
| RTP1_YEAST | 28.235% | 255 | 8.87e-20 | RNA polymerase II assembly factor RTP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTP1 PE=1 SV=1 |
| Q6CCN6_YARLI | 23.274% | 507 | 8.57e-18 | YALI0C07909p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C07909g PE=4 SV=1 |
| A0A1E4TLB8_9ASCO | 27.165% | 254 | 1.27e-12 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_12426 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0015
Protein family membership
None predicted.
Domains and repeats
-
Domain
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Domain
1
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1059
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MIA_04734_1 MDKHYDPQHVKIKYTGPLDQFFERLQTITKTVLRDPTAPSPSIQDRPTVLYNALTNSEIQQTVAQLPSDCPQTNAFTVTA FFCQSLLKIRNIILSLDRPADVPDDIIEISLNDMKIFNTMVTLIIMDGIYPRLSPGVGIPLTLRTKARQDLKTASDILGS PTPAADSALRFAQLEYILSSALIPVLKVKDNVRDLLFIGPYFPDLLAASLELAFNPAAPNRAQGARDFQEIVGQMDTYSL FLNLTSLIRPKAPAWLIVAATRVLATLPLVRPSNGVLSLVEFISGVREKPDVNIEDLDKAVRILKSIPRNMNHVEYYTKI GQQLIRVMALRDRETTVSATVHIVDSIYEQKQEMVVVGVQDALQETLAPRKRETVSADELLQGVRALEAMVRAAQPLGVI HELGKFTFVALWTLLCYAKAEEKEDLAASVGNVLVGIVSLQPEDAAGIQSMLLRNFLAASGSRLWEYGVNEDGGVAIVAT GGRTSVKTGGELALFGEIERRAGVLSECILTPLTGEKDTFTSTLFVHLIKEWLMERQEKSSQDTILLKREDEEEEDTVGA LVHAKLLEMLYTEHKDRLVKSPVELLMVIHGTLEEHVSELERATEKDKIETRTTFMTESLKIVDLGKEDDSQEEKYYPAA VKGIVEMEEDLDNREEEKKQEEPSEEESDTEILDLCFSLVLAISEDLATAFKSVDPTLEEKVPELRLLETVLGPLQYIVG HTPEGLLQGKAAACVDHIAEVLGLYFPKTSTVPAAEAEEGDRKTLSRAIQMLDDPQAPTQAHGLYVLRGLVTAKSAVVRD NWRMAVQLSLAKLMSGDAFVYLNAVKALLAVCDAHKPDEGVIEYLVDVYSGVVRERRGKKGAEAGEMAYTRKLVEEMSLD EHLKLGEVILRVVQRQGAALVGETADTIAGRMLGLASRRGVRGSVFERRGEGVPDVLRMSALGILGAAYEASFVGVASEW LEDTLDVVLGVLSMEGEQGGVGEEADEEKQVQREVEASGGVLMRRAALAVLISVARSVPDPEWVLSEDVERVGDYVSICL HDRDPIVRSHAEVLEGLLG
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.