MIA_04682_1

Protein

Length

1,226 amino acids

Protein function

EGGNOG:	0PIQ7	RPB2	dna-directed rna polymerase
SGD closest match:	S000005677	RPB2	DNA-directed RNA polymerase II subunit RPB2
CGD closest match:	CAL0000182792	orf19.3349	DNA-directed RNA polymerase subunit beta

Protein alignments

	%id	Aln length
MCA_01323_1	89.247%	1209	MCA_01323_1
A0A0J9XC33_GEOCN	85.609%	1216	DNA-directed RNA polymerase subunit beta OS=Geotrichum candidum GN=BN980_GECA08s04135g PE=3 SV=1
A0A060TCK9_BLAAD	81.609%	1218	DNA-directed RNA polymerase subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D00352g PE=3 SV=1
A0A1E3PML9_9ASCO	80.937%	1217	DNA-directed RNA polymerase subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82421 PE=3 SV=1
Q6CAD6_YARLI	80.624%	1218	DNA-directed RNA polymerase subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D03718g PE=3 SV=1
A0A1E4TCK9_9ASCO	78.571%	1218	DNA-directed RNA polymerase subunit beta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32658 PE=3 SV=1
A0A161HML7_9ASCO	83.275%	1148	DNA-directed RNA polymerase subunit beta OS=Sugiyamaella lignohabitans GN=RPB2 PE=3 SV=1
Q5A8Y5_CANAL	75.041%	1222	DNA-directed RNA polymerase subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3349 PE=3 SV=1
RPB2_YEAST	72.742%	1207	DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPB2 PE=1 SV=2
UniRef50_P08518	72.742%	1207	DNA-directed RNA polymerase II subunit RPB2 n=2828 Tax=Fungi TaxID=4751 RepID=RPB2_YEAST

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0026

Protein family membership

DNA-directed RNA polymerase, subunit 2 (IPR015712)

Domains and repeats

Domain
38 - 448
RNA polymerase, beta subunit, protrusion (IPR007644)
Domain
214 - 400
RNA polymerase Rpb2, domain 2 (IPR007642)
474 - 537
RNA polymerase Rpb2, domain 3 (IPR007645)
573 - 634
RNA polymerase Rpb2, domain 4 (IPR007646)
678 - 744
RNA polymerase Rpb2, domain 5 (IPR007647)
750 - 1,123
DNA-directed RNA polymerase, subunit 2, domain 6 (IPR007120)
1,125 - 1,217
RNA polymerase Rpb2, domain 7 (IPR007641)

1 200 400 600 800 1000 1226

Detailed signature matches

IPR015712

DNA-directed RNA polymerase, subunit 2
1. cd00653 (RNA_pol_B_...)
  
  39 - 1,216
  
  CDD
  cd00653 (RNA_pol_B_RPB2)
IPR007644

RNA polymerase, beta subunit, protrusion
1. PF04563 (RNA_pol_Rp...)
  
  38 - 448
  
  Pfam
  PF04563 (RNA_pol_Rpb2_1)
IPR007642

RNA polymerase Rpb2, domain 2
1. G3DSA:3.90.11...
  
  214 - 390
  
  GENE3D
  G3DSA:3.90.1110.10 (G3DSA:3.90.1110.10)
2. PF04561 (RNA_pol_Rp...)
  
  216 - 400
  
  Pfam
  PF04561 (RNA_pol_Rpb2_2)
IPR007645

RNA polymerase Rpb2, domain 3
1. PF04565 (RNA_pol_Rp...)
  
  474 - 537
  
  Pfam
  PF04565 (RNA_pol_Rpb2_3)
IPR007646

RNA polymerase Rpb2, domain 4
1. PF04566 (RNA_pol_Rp...)
  
  573 - 634
  
  Pfam
  PF04566 (RNA_pol_Rpb2_4)
IPR007647

RNA polymerase Rpb2, domain 5
1. PF04567 (RNA_pol_Rp...)
  
  678 - 744
  
  Pfam
  PF04567 (RNA_pol_Rpb2_5)
IPR007120

DNA-directed RNA polymerase, subunit 2, domain 6
1. G3DSA:2.40.27...
  
  750 - 885
  
  GENE3D
  G3DSA:2.40.270.10 (G3DSA:2.40.270.10)
  
  912 - 1,109
  
  GENE3D
  G3DSA:2.40.270.10 (G3DSA:2.40.270.10)
2. PF00562 (RNA_pol_Rp...)
  
  751 - 1,123
  
  Pfam
  PF00562 (RNA_pol_Rpb2_6)
IPR007641

RNA polymerase Rpb2, domain 7
1. PF04560 (RNA_pol_Rp...)
  
  1,125 - 1,217
  
  Pfam
  PF04560 (RNA_pol_Rpb2_7)
IPR007121

RNA polymerase, beta subunit, conserved site
1. PS01166 (RNA_POL_BETA)
  
  976 - 988
  
  PROSITE patterns
  PS01166 (RNA_POL_BETA)

no IPR

Unintegrated signatures

G3DSA:3.90.18...

1,126 - 1,210

GENE3D
G3DSA:3.90.1800.10 (G3DSA:3.90.1800.10)
SSF64484 (beta and ...)

20 - 1,219

SUPERFAMILY
SSF64484 (beta and beta-prime subunits of DNA dependent RNA-polymerase)
mobidb-lite (disord...)

913 - 936

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

RPB12 interaction ...

116R

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

851R

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

893D

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

895D

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

899A

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

900P

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

901G

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)

903R

RPB12 interaction site
116R, 851R, 893D, 895D, 899A, 900P, 901G, 903R
CDD
cd00653 (RNA_pol_B_RPB2)
RPB1 interaction s...

503R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

505R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

506Q

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

507L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

509N

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

512W

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

517P

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

741E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

759D

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

760H

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

761N

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

763S

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

826I

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

827L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

828C

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

829Y

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

832Y

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

834Q

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

835E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

836D

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

986K

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

988T

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

990G

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,012N

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,014H

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,017P

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,020M

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,025L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,029L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,046F

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,073H

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,081M

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,082A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,083Q

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,085F

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,098V

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,101K

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,102I

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,103H

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,105R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,106A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,127L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,128R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,129F

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,133E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,135D

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,136C

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,138I

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,140H

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,141G

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,142V

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,143A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,144A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,145F

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,147K

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,148E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,149R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,150L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,151M

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,152E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,156A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,196P

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,200K

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,202L

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,204Q

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,205E

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,207M

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,209M

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,210N

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,211I

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,212A

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,214R

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,216Y

RPB1 interaction site
503R, 505R, 506Q, 507L, 509N, 512W, 517P, 741E, 759D, 760H, 761N, 763S, 826I, 827L, 828C, 829Y, 832Y, 834Q, 835E, 836D, 986K, 988T, 990G, 1,012N, 1,014H, 1,017P, 1,020M, 1,025L, 1,029L, 1,046F, 1,073H, 1,081M, 1,082A, 1,083Q, 1,085F, 1,098V, 1,101K, 1,102I, 1,103H, 1,105R, 1,106A, 1,127L, 1,128R, 1,129F, 1,133E, 1,135D, 1,136C, 1,138I, 1,140H, 1,141G, 1,142V, 1,143A, 1,144A, 1,145F, 1,147K, 1,148E, 1,149R, 1,150L, 1,151M, 1,152E, 1,156A, 1,196P, 1,200K, 1,202L, 1,204Q, 1,205E, 1,207M, 1,209M, 1,210N, 1,211I, 1,212A, 1,214R, 1,216Y
CDD
cd00653 (RNA_pol_B_RPB2)
RPB10 interaction ...

799Q

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

800K

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

821N

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

823I

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

844S

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

847R

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

995N

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,008D

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,035A

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,036L

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,038G

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,069E

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)

1,086L

RPB10 interaction site
799Q, 800K, 821N, 823I, 844S, 847R, 995N, 1,008D, 1,035A, 1,036L, 1,038G, 1,069E, 1,086L
CDD
cd00653 (RNA_pol_B_RPB2)
RPB11 interaction ...

832Y

RPB11 interaction site
832Y, 846D, 994R, 1,075H
CDD
cd00653 (RNA_pol_B_RPB2)

846D

RPB11 interaction site
832Y, 846D, 994R, 1,075H
CDD
cd00653 (RNA_pol_B_RPB2)

994R

RPB11 interaction site
832Y, 846D, 994R, 1,075H
CDD
cd00653 (RNA_pol_B_RPB2)

1,075H

RPB11 interaction site
832Y, 846D, 994R, 1,075H
CDD
cd00653 (RNA_pol_B_RPB2)
RPB3 interaction s...

846D

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

847R

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

851R

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

968R

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

970T

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

995N

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

996E

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

997D

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,000F

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,002A

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,003E

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,074G

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,075H

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,076T

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,077G

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,078R

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,079K

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,080L

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,081M

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,083Q

RPB3 interaction site
846D, 847R, 851R, 968R, 970T, 995N, 996E, 997D, 1,000F, 1,002A, 1,003E, 1,074G, 1,075H, 1,076T, 1,077G, 1,078R, 1,079K, 1,080L, 1,081M, 1,083Q
CDD
cd00653 (RNA_pol_B_RPB2)

Protein sequence

>MIA_04682_1
MSDEQEYDIGDGYGYDEDTELTSEDSWAIISLFFNEKGLVSQQLDSFDEFIETTIQSLIYEDKALILDQPAQHTTANDNI
SKRYEIEFGKIYLSRPTMTEADGSTHPMFPQEARLRNLTYSSPLYVDMGKRVLTSKDAEYTNADDVQWTVVPNESDEMSK
VYIGKVPIMVRSKFCMLRDLKESEFYDLRECPYDQGGYFVINGSEKVLIAQERSAANIVQVFKKSAPSPISHIAEIRSAL
EKGSRLISSMSIKLMAKGERTIKATIPYVKSDIPIVVVFRALGVVPDGDILEHICYDQNDTEMLEMLKPCVEESFPVQDR
ETALDLIGRRGSAIGITRDKRMRYARDILQKELLPNITQDEGFESRKAFFLGYMIHKLLLVALDRSDPDDRDHFGKKRLD
LAGPLLAQLFRILFKKLTRDIYRYMQKCVETNKDFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMSTRAGVSQVLNRYT
FSSTLSHLRRTNTPIGRDGKIARPRQLHNTHWGFVCPAETPEGQACGLVKNLSLMSGVSVGTPSALIVCYLEEWGMEPLE
DYVPHASPNATRIFVNGVWVGVHQRPSHMANAIKNLRRKGDISAEVSITRDIRSKELRILTDAGRVYRPLFVVESEGPNK
GQLRITKDIVNTIITQQESEVMAGEDETKDNIDESIDWEWLVKNGYIEYIDGEEEETVMIAMSNEDLEISRQLQAGADID
YRDSNRRNTFNPHAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYLTNYSVRMDTMANILYYPQK
PLATTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSMIMNQGSIDRGLFRSLFFRSYMDQERRIGMSVVEEFEKPTRAD
TLRLKHGTYDKLDEDGLIAPGVRVSGEDIIIGKTAPIPPDSQEQGQRTQYHTKRDVSTPLRSTENGIVDQVLLTTNQEGL
RFVKVRMRTTKVPQIGDKFASRHGQKGTIGVTYRNEDMPFSAEGVVPDLVINPHAIPSRMTVAHLIECLLSKVSALSGYE
GDATPFTDVTVDDVSKLLRESGYHSRGFEVMYHGHTGRKLMAQVFLGPTYYQRLRHMVDDKIHARARGPVQILTRQPVEG
RSRDGGLRFGEMERDCMIAHGVAAFLKERLMEASDAFRVHICGVCGLMSVIAKLDEVSYECTSCKNKTNIYQIHIPYAAK
LLFQELMAMNIAPRLYTERSGYSVRV

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0032549 ribonucleoside binding

Cellular Component

None predicted.

Filter view on

Entry type

Status

Per-residue features