MCA_01323_1

Protein

Length

1,224 amino acids

Gene name: RPB2

Description: DNA-directed RNA polymerase II subunit RPB2

Browser: contigA:4152301-4156034-

RNA-seq: read pairs 6494, FPKM 65.5, percentile rank 71.0% (100% = highest expression)

Protein function

Annotation:		RPB2	DNA-directed RNA polymerase II subunit RPB2
KEGG:	K03010	RPB2	DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
EGGNOG:	0PIQ7	RPB2	dna-directed rna polymerase
SGD closest match:	S000005677	RPB2	DNA-directed RNA polymerase II subunit RPB2
CGD closest match:	CAL0000182792	orf19.3349	DNA-directed RNA polymerase subunit beta

Protein alignments

	%id	Aln length
MIA_04682_1	89.24%	1217	MIA_04682_1
A0A0J9XC33_GEOCN	86.31%	1220	DNA-directed RNA polymerase subunit beta OS=Geotrichum candidum GN=BN980_GECA08s04135g PE=3 SV=1
A0A060TCK9_BLAAD	82.24%	1222	DNA-directed RNA polymerase subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D00352g PE=3 SV=1
A0A1E3PM85_9ASCO	82.47%	1221	DNA-directed RNA polymerase subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82326 PE=3 SV=1
Q6CAD6_YARLI	81.18%	1222	DNA-directed RNA polymerase subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D03718g PE=3 SV=1
A0A1E4TCK9_9ASCO	79.49%	1214	DNA-directed RNA polymerase subunit beta OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32658 PE=3 SV=1
A0A161HML7_9ASCO	82.88%	1145	DNA-directed RNA polymerase subunit beta OS=Sugiyamaella lignohabitans GN=RPB2 PE=3 SV=1
Q5A8Y5_CANAL	76.16%	1229	DNA-directed RNA polymerase subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3349 PE=3 SV=1
RPB2_YEAST	72.79%	1213	DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPB2 PE=1 SV=2
UniRef50_P08518	72.79%	1213	DNA-directed RNA polymerase II subunit RPB2 n=2828 Tax=Fungi TaxID=4751 RepID=RPB2_YEAST

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0033

Protein family membership

DNA-directed RNA polymerase, subunit 2 (IPR015712)

Domains and repeats

Domain
39 - 449
RNA polymerase, beta subunit, protrusion (IPR007644)
Domain
217 - 401
RNA polymerase Rpb2, domain 2 (IPR007642)
475 - 538
RNA polymerase Rpb2, domain 3 (IPR007645)
574 - 635
RNA polymerase Rpb2, domain 4 (IPR007646)
676 - 742
RNA polymerase Rpb2, domain 5 (IPR007647)
749 - 1,121
DNA-directed RNA polymerase, subunit 2, domain 6 (IPR007120)
1,123 - 1,215
RNA polymerase Rpb2, domain 7 (IPR007641)

1 200 400 600 800 1000 1224

Detailed signature matches

IPR015712

DNA-directed RNA polymerase, subunit 2
1. cd00653 (RNA_pol_B_...)
  
  40 - 1,214
  
  CDD
  cd00653 (RNA_pol_B_RPB2)
IPR007644

RNA polymerase, beta subunit, protrusion
1. PF04563 (RNA_pol_Rp...)
  
  39 - 449
  
  Pfam
  PF04563 (RNA_pol_Rpb2_1)
IPR007642

RNA polymerase Rpb2, domain 2
1. PF04561 (RNA_pol_Rp...)
  
  217 - 401
  
  Pfam
  PF04561 (RNA_pol_Rpb2_2)
IPR007645

RNA polymerase Rpb2, domain 3
1. PF04565 (RNA_pol_Rp...)
  
  475 - 538
  
  Pfam
  PF04565 (RNA_pol_Rpb2_3)
IPR007646

RNA polymerase Rpb2, domain 4
1. PF04566 (RNA_pol_Rp...)
  
  574 - 635
  
  Pfam
  PF04566 (RNA_pol_Rpb2_4)
IPR007647

RNA polymerase Rpb2, domain 5
1. PF04567 (RNA_pol_Rp...)
  
  676 - 742
  
  Pfam
  PF04567 (RNA_pol_Rpb2_5)
IPR007120

DNA-directed RNA polymerase, subunit 2, domain 6
1. G3DSA:2.40.27...
  
  911 - 1,107
  
  GENE3D
  G3DSA:2.40.270.10 (G3DSA:2.40.270.10)
2. PF00562 (RNA_pol_Rp...)
  
  749 - 1,121
  
  Pfam
  PF00562 (RNA_pol_Rpb2_6)
IPR007641

RNA polymerase Rpb2, domain 7
1. PF04560 (RNA_pol_Rp...)
  
  1,123 - 1,215
  
  Pfam
  PF04560 (RNA_pol_Rpb2_7)
IPR007121

RNA polymerase, beta subunit, conserved site
1. PS01166 (RNA_POL_BETA)
  
  974 - 986
  
  PROSITE patterns
  PS01166 (RNA_POL_BETA)

no IPR

Unintegrated signatures

G3DSA:3.90.11...

31 - 286

GENE3D
G3DSA:3.90.1100.10 (G3DSA:3.90.1100.10)

302 - 794

GENE3D
G3DSA:3.90.1100.10 (G3DSA:3.90.1100.10)
G3DSA:3.90.18...

1,124 - 1,208

GENE3D
G3DSA:3.90.1800.10 (G3DSA:3.90.1800.10)
SSF64484 (beta and ...)

21 - 1,217

SUPERFAMILY
SSF64484 (beta and beta-prime subunits of DNA dependent RNA-polymerase)

Residue annotation

RPB12 interaction ...

117R

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

849R

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

891D

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

893D

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

897A

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

898P

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

899G

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)

901R

RPB12 interaction site
117R, 849R, 891D, 893D, 897A, 898P, 899G, 901R
CDD
cd00653 (RNA_pol_B_RPB2)
RPB1 interaction s...

504R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

506R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

507Q

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

508L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

510N

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

513W

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

518P

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

739E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

757D

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

758H

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

759N

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

761S

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

824I

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

825L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

826C

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

827Y

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

830Y

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

832Q

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

833E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

834D

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

984K

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

986T

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

988G

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,010N

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,012H

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,015P

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,018M

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,023L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,027L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,044F

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,071H

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,079M

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,080A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,081Q

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,083F

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,096V

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,099K

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,100I

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,101H

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,103R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,104A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,125L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,126R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,127F

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,131E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,133D

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,134C

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,136I

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,138H

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,139G

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,140V

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,141A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,142A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,143F

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,145K

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,146E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,147R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,148L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,149M

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,150E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,154A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,194P

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,198K

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,200L

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,202Q

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,203E

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,205M

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,207M

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,208N

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,209I

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,210A

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,212R

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)

1,214Y

RPB1 interaction site
504R, 506R, 507Q, 508L, 510N, 513W, 518P, 739E, 757D, 758H, 759N, 761S, 824I, 825L, 826C, 827Y, 830Y, 832Q, 833E, 834D, 984K, 986T, 988G, 1,010N, 1,012H, 1,015P, 1,018M, 1,023L, 1,027L, 1,044F, 1,071H, 1,079M, 1,080A, 1,081Q, 1,083F, 1,096V, 1,099K, 1,100I, 1,101H, 1,103R, 1,104A, 1,125L, 1,126R, 1,127F, 1,131E, 1,133D, 1,134C, 1,136I, 1,138H, 1,139G, 1,140V, 1,141A, 1,142A, 1,143F, 1,145K, 1,146E, 1,147R, 1,148L, 1,149M, 1,150E, 1,154A, 1,194P, 1,198K, 1,200L, 1,202Q, 1,203E, 1,205M, 1,207M, 1,208N, 1,209I, 1,210A, 1,212R, 1,214Y
CDD
cd00653 (RNA_pol_B_RPB2)
RPB10 interaction ...

797Q

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

798K

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

819N

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

821T

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

842S

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

845R

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

993N

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,006D

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,033A

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,034L

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,036G

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,067E

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)

1,084L

RPB10 interaction site
797Q, 798K, 819N, 821T, 842S, 845R, 993N, 1,006D, 1,033A, 1,034L, 1,036G, 1,067E, 1,084L
CDD
cd00653 (RNA_pol_B_RPB2)
RPB11 interaction ...

830Y

RPB11 interaction site
830Y, 844D, 992R, 1,073H
CDD
cd00653 (RNA_pol_B_RPB2)

844D

RPB11 interaction site
830Y, 844D, 992R, 1,073H
CDD
cd00653 (RNA_pol_B_RPB2)

992R

RPB11 interaction site
830Y, 844D, 992R, 1,073H
CDD
cd00653 (RNA_pol_B_RPB2)

1,073H

RPB11 interaction site
830Y, 844D, 992R, 1,073H
CDD
cd00653 (RNA_pol_B_RPB2)
RPB3 interaction s...

844D

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

845R

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

849R

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

966R

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

968T

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

993N

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

994E

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

995D

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

998F

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,000A

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,001E

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,072G

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,073H

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,074T

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,075G

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,076K

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,077K

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,078L

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,079M

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

1,081Q

RPB3 interaction site
844D, 845R, 849R, 966R, 968T, 993N, 994E, 995D, 998F, 1,000A, 1,001E, 1,072G, 1,073H, 1,074T, 1,075G, 1,076K, 1,077K, 1,078L, 1,079M, 1,081Q
CDD
cd00653 (RNA_pol_B_RPB2)

Protein sequence

>MCA_01323_1
MDMDDQEMDMDNGYGYDEDTELTSEDSWAIISLFFNEKGLVSQQLDSFDEFIETTIQSLVLEDSTLILDQPAQHTTANDN
ISKRYEITFGKIYLSRPTMTEADGTTHPMFPQEARLRNLTYSSPLYVDMSKRVLTSKSNEYSTEEEVWQPVVNESDNAIT
RTYIGKVPIMVRSKFCMLRDLREADFYELNECPYDQGGYFIINGSEKVLIAQERSAANIVQVFKKSAPSPISHIAEIRSA
LEKGSRLISSMSIKLMAKGDKTIKATLPYVKSDIPIVLVFRALGVVPDGDILEHICYDQSDTEMLEMLKPCIEEGFFVQD
REVALDFIGRRGSAMGITREKRMRYARDILQKELLPNITQDEGFETRKAFFLGYMIHKLLLVALERKDPDDRDHFGKKRL
DLAGPLLAQLFRILFKKLTRDIYRYMQKCVENNKDFNLNEAVKSTTITNGLKYSLATGNWGDQKKAMSTRAGVSQVLNRY
TFSSTLSHLRRTNTPIGRDGKIARPRQLHNTHWGFVCPAETPEGQACGLVKNLSLMSGVSVGTPSNPIVCFLEEWGMEPL
EDYVPHASPNATRVFVNGVWVGVHQDPGSIANTMKTLRRAGDIPAEVSITRDIRSQELRVLTDAGRVYRPLFVVEHEGPN
KGQLKITKDIINAVIAQQEEEAAGEETAANEDTIDWAYLVKNGIIEYIDGEEEETVMIAMSNEDLELSRQLQSGVEIEFA
DNARRALTNPNAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYLTNYNVRMDTMSNILYYPQKPL
ATTRSMEFLKFRELPAGQNATVAILCYSGYNQEDSMIMNQGSIDRGLFRSLFFRSYMDQERRIGMSVVEEFEKPTRADTL
RLKHGTYNKLDDDGLIAPGIRVSGEDIIIGKTAPIPPDAEELGQRTKFHTKRDVSTPLRSTENGIVDQVLLTTNQEGLRF
VKVRMRTTKIPQIGDKFASRHGQKGTIGVTYRNEDMPFSAEGVVPDLVINPHAIPSRMTVAHLIECLLSKVSALSGYEGD
ATPFTDVTVDDISKLLRQHGYHSRGFEVMYHGHTGKKLMAQVFLGPTYYQRLRHMVDDKIHARARGPVQILTRQPVEGRS
RDGGLRFGEMERDCMIAHGVAAFLKERLMEASDAFRVHVCGICGLMSVVANLKKYQFECRSCKNKTNIYQIHIPYAAKLL
FQELMAMNIAPRMYTERSGYSIRV

GO term prediction

Biological Process

GO:0006351 transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0032549 ribonucleoside binding

Cellular Component

None predicted.

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Entry type

Status

Per-residue features