Protein

MIA_04532_1

Length
603 amino acids

Browser: contig06:271740-273552+

Protein function

EGGNOG:0PFB8NOT4complex. Subunit
SGD closest match:S000000870MOT2General negative regulator of transcription subunit 4
CGD closest match:CAL0000188533NOT4CCR4-NOT core ubiquitin-protein ligase subunit

Protein alignments

%idAln lengthE-value
MCA_05891_177.971%3451.96e-161MCA_05891_1
A0A167DBS7_9ASCO85.950%2424.85e-150CCR4-NOT core ubiquitin-protein ligase subunit MOT2 OS=Sugiyamaella lignohabitans GN=MOT2 PE=4 SV=1
Q6C372_YARLI84.211%2471.57e-143YALI0F02101p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F02101g PE=4 SV=1
UniRef50_Q6C37284.211%2473.64e-140YALI0F02101p n=5 Tax=Saccharomycetales TaxID=4892 RepID=Q6C372_YARLI
A0A0J9XHF3_GEOCN84.647%2413.17e-141Similar to Saccharomyces cerevisiae YER068W MOT2 Subunit of the CCR4-NOT complex OS=Geotrichum candidum GN=BN980_GECA15s00054g PE=4 SV=1
A0A060T8J1_BLAAD81.452%2486.45e-141ARAD1C29304p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C29304g PE=4 SV=1
A0A1E3PKX2_9ASCO64.259%2633.59e-115Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46621 PE=4 SV=1
A0A1D8PSH4_CANAL65.217%2533.16e-113CCR4-NOT core ubiquitin-protein ligase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOT4 PE=4 SV=1
A0A1E4TF00_9ASCO65.587%2473.17e-113Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2062 PE=4 SV=1
NOT4_YEAST60.000%2503.41e-103General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOT2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0143

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 603

Detailed signature matches

  1. Domain IPR013083
    Zinc finger, RING/FYVE/PHD-type
    1. G3DSA:3.30.40.10
  2. Domain IPR001841
    Zinc finger, RING-type
    1. PS50089 (ZF_RING_2)
  3. Domain IPR000504
    RNA recognition motif domain
    1. SSF54928 (RNA-bindi...)
    2. PS50102 (RRM)
    3. PF00076 (RRM_1)
  4. Domain IPR034261
    CNOT4, RNA recognition motif
    1. cd12438 (RRM_CNOT4)
  5. Domain IPR003954
    RNA recognition motif domain, eukaryote
    1. SM00361 (rrm2_1)
  6. Domain IPR000571
    Zinc finger, CCCH-type
    1. PS50103 (ZF_C3H1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.30.70...
  3. PF14570 (zf-RING_4)
  4. SSF57850 (RING/U-box)
  5. cd16618 (mRING-HC-C...)
  6. mobidb-lite (disord...)

Residue annotation

  1. Zn binding site cd...
  2. polypeptide substr...

Protein sequence

>MIA_04532_1
MVYDAGDSFISDDEEELCPLCVEEMDISDKNFKPCPCGYQVCQFCYNNIRQNPQLNGRCPACRRPYDDATVEYKAISQEE
WKKEHDKQSRRERDRKQRQREKKESEQQTSRKHLSGMRVIQKNLVYVIGLNPGIPTEELHNTLRTDQFFGQYGKIQKIVI
NRRNNANGNPGIGVYVTFARKEDAAKCIAAVDGSINDGKYLRAAYGTTKYCSSYLRGQSCPNPNCMFLHEPGEEADSYTR
KDLSTFQVTTSNTGSSGRSGSNTSASGPPKQVPKQLAHSSSSTASRPPDSIVSSSPPSSHDHDFHLPPTVSWATKASPST
PQAKLHTASLASYPPLPVSSAHTAASMAATDSSSSLSSTASKKRETTPPPVFEEDETHEEAIIEDIDHGEEQKEELKDQE
QDQSDEEDYLPCPEPRTPDVAVTYMHDSLVALADPSAYTYAFSGEVVTEHRLTHAFPLFSYTQETAAPKDSKTESSDPVA
EYYSEMEEYMFKPNATAQRFRASIGFLDAARQQQFELQLQLQQQQQQQLALQRQLEQQQQLRVQQQQFGLDLAKTATPPP
PGLFASPAQANYANLAGVPAAPTTTTTSNNSKELLNHLMKGSK

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0046872 metal ion binding

Cellular Component

None predicted.