Protein
MIA_04255_1
Length
337 amino acids
Browser: contig05:1208639-1209653+
Protein function
| EGGNOG: | 0PIXX | SWD3 | WD repeat protein |
|---|---|---|---|
| SGD closest match: | S000000379 | SWD3 | COMPASS component SWD3 |
| CGD closest match: | CAL0000190787 | SWD3 | Swd3p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X7Q2_GEOCN | 54.386% | 342 | 3.59e-128 | Similar to Saccharomyces cerevisiae YBR175W SWD3 Essential subunit of the COMPASS (Set1C) complex OS=Geotrichum candidum GN=BN980_GECA05s02452g PE=4 SV=1 |
| MCA_06056_1 | 50.418% | 359 | 2.28e-126 | MCA_06056_1 |
| A0A167EGN1_9ASCO | 52.698% | 315 | 1.27e-115 | Swd3p OS=Sugiyamaella lignohabitans GN=SWD3 PE=4 SV=1 |
| UniRef50_A0A167EGN1 | 52.698% | 315 | 3.49e-112 | Swd3p n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A167EGN1_9ASCO |
| Q6C0A7_YARLI | 47.619% | 315 | 3.74e-104 | YALI0F26389p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F26389g PE=4 SV=1 |
| A0A060T584_BLAAD | 49.141% | 291 | 7.15e-96 | ARAD1B08624p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B08624g PE=4 SV=1 |
| A0A1E3PIW7_9ASCO | 42.433% | 337 | 3.10e-88 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47003 PE=4 SV=1 |
| A0A1D8PPT7_CANAL | 35.912% | 362 | 1.39e-70 | Swd3p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SWD3 PE=4 SV=1 |
| A0A1E4TBL2_9ASCO | 39.130% | 230 | 7.58e-52 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17995 PE=4 SV=1 |
| SWD3_YEAST | 30.284% | 317 | 2.30e-42 | COMPASS component SWD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWD3 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0608
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
337
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_04255_1 MTDPLQDVATANGLSSNVTEKSQRYKCKFILKAHTKPVTAVKFSPNGKYIATCSADASIRIWDAYTGQHIAAFEGHIQGI SDISWSPDSLYLASVSDDKTVRVWEVSKETELLPEPSAGIQAARILRVMRGHTHHINSIDYNFKGNLLVSGSADENLRIW DVRHSRCLRTLAAHSDPVTAVCFSSDGTIIASASQDGLIRLWDTRTGHCLKTLVGKTNVPVMYLRFSPNSKFLLASTMDA TLRLWDYMRDKVVKTYKVDEFDEHRYSSSSIFIPHGRPLVAQGMGPDSITIWDLQDRIVVETLKGHTDVVLGLDIHPTEN LLVSSSKDGTCRIWKGL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.