Protein
MIA_04235_1
Length
1,698 amino acids
Browser: contig05:1143999-1149382-
Protein function
| EGGNOG: | 0PHM3 | RTC1 | WD repeat protein |
|---|---|---|---|
| SGD closest match: | S000005498 | RTC1 | Restriction of telomere capping protein 1 |
| CGD closest match: | CAL0000194538 | RTC1 | Restriction of telomere capping protein 1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_02712_1 | 47.284% | 626 | 3.29e-165 | MCA_02712_1 |
| A0A0J9X384_GEOCN | 46.446% | 605 | 1.30e-159 | Similar to Saccharomyces cerevisiae YOL138C RTC1 Subunit of the SEA (Seh1-associated) complex OS=Geotrichum candidum GN=BN980_GECA01s01836g PE=4 SV=1 |
| UniRef50_A0A0J9X384 | 46.446% | 605 | 2.66e-156 | Similar to Saccharomyces cerevisiae YOL138C RTC1 Subunit of the SEA (Seh1-associated) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X384_GEOCN |
| A0A167EQU9_9ASCO | 38.060% | 536 | 2.97e-101 | Rtc1p OS=Sugiyamaella lignohabitans GN=RTC1 PE=4 SV=1 |
| A0A060T7G0_BLAAD | 33.854% | 576 | 1.70e-93 | ARAD1B18634p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18634g PE=4 SV=1 |
| Q6CE79_YARLI | 31.648% | 534 | 1.57e-76 | YALI0B17842p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B17842g PE=4 SV=1 |
| A0A1E4TA67_9ASCO | 32.741% | 394 | 8.93e-56 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3248 PE=4 SV=1 |
| RTC1_CANAL | 30.072% | 419 | 8.90e-34 | Restriction of telomere capping protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RTC1 PE=3 SV=1 |
| A0A1E3PRS9_9ASCO | 29.412% | 306 | 1.96e-31 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81058 PE=4 SV=1 |
| RTC1_YEAST | 23.729% | 354 | 7.33e-24 | Restriction of telomere capping protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTC1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0383
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1200
1400
1698
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MIA_04235_1 MANGPYDHSTLYDDIHRIFTAPASRSGSNATTENLPFSYGSAAPNLTHSDNMDPDHPSSRISRDQSVLSFHHDLQVPRSR TSIDVTTTNSSVPPVSVPAARETYANRAAKATGGALARFGKVIIGANSSSSSNNNNSNNTNNNEYENDRGIYNESAISSG RNSDPPSRDNSISGSFTGYANFGHQNPQIQRSLSTAPGSSRPLLSRANSASIVNQFSTSSSPRQLRYMETKKKDFKYYAR NEILAMGPSATEHAVAIAGKDFFQILRIDNDSATAAQDIRSIQDSRNRDFDKLHNVTDLSWGRQEYRHTIALATSGGQIL VYNIDKQSPKPVTRINDSNRTINSICFHPYYGYNLVSAGGDGSVKIWDLRQTKKKPAISFLKTGDVVREVQCSPFDNNKY AAIYDSGAVMRWDSRYPRLVDRRINAHSGSGLSFDWHPEYDYIVTGGIDRQIQIWYMNSENRNPDLVIQNPQPVAKVRWQ HDILNSTASSKYGVLNTDIACCNMSLYDNGIYVWNPRRPHIPHYILEPHTKAVTDVFWRSQSTLWSISRDKTFSQTVLDP NHMAIKRLNSQAFSWSQNDTFSFVAQDRYEELYDKDPGHALPPGAGGTNVSAAALTAAATAAAAANDDERRRGSSAGQSV SATGLRKPLTPVPVPPSTKQFQAVYTMSFPGISAESFQFCAENYLYYDSTPSINALRQSVANETVDITTTTGMRAVQICQ YNAKAAALSGKFRTSQTWYMLQEVIGQERVDFLKQYNENLLDIGNYSGLLLQPYASRIKETINTPDISPMALPSIPADDH SLKLVRELSPDKYRKASTVSSLSGLRNSDNQQSLSIAATMALSGTPILSHADTNSLAPILSSEDSSFHDQNDTKDDIISS GESSSTSSSKQNRRASQPYTTSSSPGYIHPKALSNASSEFPLYFDLLSQDRELNRKKTSQSSRNHTSSPLIQYVSNSESM GDLTAMYSSRHDPKYRRFRRRDTHDGISSPQEPQNRPFTTYKKNVQSDSESLNDSSSASHTESVKAKSSQKDHSSNIEPY DIERAMLAYASYESEASNKPRNGSDGSTIRRIVSQRGIGSRTLESDDEEDSSEDESLSSGGYESRDEESASLKNSGYSSR NDDDDDLSNSDSRSYESEDESSSLEAEPIRPITSNTTNKTTNSLWSRPSMRLRRSSQVSSHYSAHSKHSIYSRRRSHGPN LVHHPAHKTRMNPLGNAHHRSHLNHVHNAKTESQKPGTPLEGITNNVVAPNLTKLYRIYQRTLQHPWKAENMVAQAAWYA ISQGDIQLAATLGMLFLRDYPGAFHHKNSEGFEFEFGDLEVHNESAPPASAAALDIRLSPRLGVPSSDPYYNHVGDAFDD QKEKDVCKEGEKVVEEWVHTYLQDLRKHEQHVVAAEIIKLSPFESVRQSGQIDTAVDTVCHRCAVPLSENEAAAQAEMLD MELPPTFASSEDRPPRVEFWYCRSCKELLDGCAYCRLPVKNFGVSFFECGHKVHAQCLQDWARECGEIPDPSEIKETLLE DVSLERPGAPAPGTLGAPFGTQNPGISRSNTSIYGPKSGSLLVGSSSKAIASTSSSVSGASAAAAAAAAAAAASAAAANS NNGQYNFQRSYSASYMPSSWFPTSSSRQQPVPPPQQLAPAPSAPLPGFQSAQSSPTMMHQRLFGGAGNVATPTPPPAMQK TFRPALECPTGCGAVLVI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.