Protein
MCA_02712_1
Length
1,663 amino acids
Gene name: RTC1
Description: Restriction of telomere capping protein 1
Browser: contigB:2134102-2139167-
RNA-seq: read pairs 1235, FPKM 9.2, percentile rank 24.5% (100% = highest expression)
Protein function
| Annotation: | RTC1 | Restriction of telomere capping protein 1 | |
|---|---|---|---|
| KEGG: | K20408 | WDR24 | WD repeat-containing protein 24 |
| EGGNOG: | 0PHM3 | RTC1 | WD repeat protein |
| SGD closest match: | S000005498 | RTC1 | Restriction of telomere capping protein 1 |
| CGD closest match: | CAL0000194538 | RTC1 | Restriction of telomere capping protein 1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04235_1 | 47.28% | 626 | 1e-162 | MIA_04235_1 |
| A0A0J9X384_GEOCN | 45.70% | 477 | 6e-117 | Similar to Saccharomyces cerevisiae YOL138C RTC1 Subunit of the SEA (Seh1-associated) complex OS=Geotrichum candidum GN=BN980_GECA01s01836g PE=4 SV=1 |
| UniRef50_A0A0J9X384 | 45.70% | 477 | 1e-113 | Similar to Saccharomyces cerevisiae YOL138C RTC1 Subunit of the SEA (Seh1-associated) complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X384_GEOCN |
| A0A167EQU9_9ASCO | 41.49% | 376 | 2e-86 | Rtc1p OS=Sugiyamaella lignohabitans GN=RTC1 PE=4 SV=1 |
| A0A060T7G0_BLAAD | 40.59% | 372 | 4e-78 | ARAD1B18634p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18634g PE=4 SV=1 |
| Q6CE79_YARLI | 38.26% | 379 | 4e-77 | YALI0B17842p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B17842g PE=4 SV=1 |
| A0A1E4TA67_9ASCO | 33.60% | 375 | 5e-54 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3248 PE=4 SV=1 |
| RTC1_CANAL | 27.68% | 401 | 7e-32 | Restriction of telomere capping protein 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RTC1 PE=3 SV=1 |
| RTC1_YEAST | 21.93% | 342 | 8e-16 | Restriction of telomere capping protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTC1 PE=1 SV=2 |
| A0A1E3PRS9_9ASCO | 33.02% | 106 | 8e-13 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81058 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0136
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1200
1400
1663
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_02712_1 MYSENSEFTNTSNQNSPQSPGQKRNKPSNQTHSASYYYPDQLSAETASGTSYPAINSVSSSFSPFTDFSHDELIPPKASL SNDKTLSSVPYSDFTQSSKSISNGAPGRFGNNNMSQQPPVKESYANRFRNIIQKSSIMLYSSPASSNTGRPSISRTQSSP YVSSSLRTPTFPKPKQNLKYEARSEITAMSPSPTEHAVAIAGKDFFQILSVSQDNITVTQDLTKGSQGNRDLDKSQPVTG LSWGRHHEYRRSIAKATLGGNVFIYNIDSNVNKPIVRFSDGGRVFHSITFHPHISHNLVTSANDGSTKVWDLRQHNSNAK RKTYASQNAAISFLKSGDGAREVRCSPFDSTRYAVIYDSGAIYTWDSRNPKYPERRINAHTRYGVSIDWHEEYNYIVSGG KDKQIQIWNMSPESTSRTPDHVIMNPAPVSKVRWQYDILQSSKSTKYGVLDTEIACCNLSTFDYSVYVWNLKRPFIPHYV VDSHTQPVNDVFWRSHNTLWSISKDKTFAQSVLDPTETVIKHLNSQAISWSNQDTISFVQQNRDEDIYEKDYDPAESENY HGISSKPPSLYDESQTEEKKDQESIYSGKDLDSFPEKRQGPDDAKNEKPTFNIRNKAAESKKNNNTQSNTSEKTISSNIK EPHKSVLSAPQYSPSQSIYTIHLSDISPAAFHYCADNYIYFDTPLDSTDLNDEHFLSATQIRSSTTGLRAVEICGHNASV AANAGRFRTSQTWNILQEVIGKERIAFFEYESKKKHAMQQQKQPIKGHLKDFASKISESLKSSESSPIMVGVDEIIRESE TPGRGSSTLKKISTGDDNIEEPVSPDFKLDDNNTITRKIDLENINMEDSKGNVNSLSSSCETTSSYQSELSDTPPIPINI ATKTDNVLAQQSLNNLASSSNMRSIPSDKHPESAMNTGNVMTDLRRAVPDYAGYISDGSSSNLKGLNYDEPSQRQPLLSS RFFNNSSDGEAKNSRLSKNKRTKNSNNSFDLSFSDDDIDDEYDTSRSKQSQKSGKLFQKNDKASIISASGNESSLSALSD DNSILSDDDEDDDLSNDNDTVRSFTSRLFKNGAINESGILNYVQRQKPENSHIRHPRRRRQSKHERDFSVRENMQVNNFP PSKMAATGQALVSDSLTFRYQEYQKTLEHPWKAENMIRQVVLYFMQLGDIQMCATLGMLFLRDYPGAFRVSQAEKGSKIS SPSEEENVVMEWISLYLQELTKNEQYVIAAEIIKRCSSLAVAKPLSNKSKNVTNPFEVISQKGKIDTLIDTICTKCNAAL ITENSAAFQAQLEEDSKIKEEMALRSRLNYKNNHPSSSNSPLFLTPKLHPEKSASSANDSKKEITELSDTTLQAKSGIIP FRADNDSTASSITKLSLSQIDDHEKDTQSLYFPKPDSQSLFSTIPGLHDQQQGNDGHDPSCRCNLNINQDKTVNTVAFWY CAKCQSLLEGCTYCKLPVKGLAVCIFECGHTIHPECLQKWANECSCEDIPDPRAFQRYTTKDDSSRYGNSYNVGRIGLSF GDFGSENEGHYRQSSTLSESIALNSASSTASTGINPYLSSIDSESTEEDFISETSLSLQPDQKLNKRLVTSQSSNFPQRQ RRYTEDDDRSKSSSDMNSFLPSIGSISQPAFQKVAEKPTDKKIKKSLHPLLECPTGCGTVLVM
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.