Protein
MIA_04123_1
Length
143 amino acids
Browser: contig05:828055-828554+
Protein function
| EGGNOG: | 0PMVP | RPB8 | DNA-directed RNA polymerases i |
|---|---|---|---|
| SGD closest match: | S000005750 | RPB8 | DNA-directed RNA polymerases I, II, and III subunit RPABC3 |
| CGD closest match: | CAL0000181508 | RPB8 | DNA-directed RNA polymerase core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X899_GEOCN | 81.12% | 143 | 2e-84 | Similar to Saccharomyces cerevisiae YOR224C RPB8 RNA polymerase subunit ABC14.55, common to RNA polymerases I, II, and III OS=Geotrichum candidum GN=BN980_GECA04s03167g PE=4 SV=1 |
| MCA_00065_1 | 88.11% | 143 | 4e-84 | MCA_00065_1 |
| A0A060T8N2_BLAAD | 75.52% | 143 | 4e-79 | ARAD1C38258p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C38258g PE=4 SV=1 |
| A0A1E3PNK5_9ASCO | 64.63% | 147 | 1e-65 | RNA polymerase subunit ABC14.5 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49455 PE=4 SV=1 |
| RPAB3_YEAST | 57.53% | 146 | 8e-57 | DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPB8 PE=1 SV=1 |
| UniRef50_P20436 | 57.53% | 146 | 2e-53 | DNA-directed RNA polymerases I, II, and III subunit RPABC3 n=73 Tax=Saccharomycetales TaxID=4892 RepID=RPAB3_YEAST |
| Q59MZ8_CANAL | 56.25% | 144 | 8e-56 | DNA-directed RNA polymerase core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPB8 PE=4 SV=1 |
| A0A1E4TCC3_9ASCO | 52.38% | 147 | 7e-56 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32678 PE=4 SV=1 |
| Q6C2A8_YARLI | 63.57% | 140 | 1e-54 | YALI0F09383p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F09383g PE=4 SV=1 |
| A0A161HJW4_9ASCO | 72.90% | 107 | 2e-54 | DNA-directed RNA polymerase core subunit RPB8 OS=Sugiyamaella lignohabitans GN=RPB8 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1640
Protein family membership
- RNA polymerase, Rpb8 (IPR005570)
Domains and repeats
-
Domain
1
20
40
60
80
100
120
143
Detailed signature matches
-
-
SM00658 (rpol8neu)
-
PF03870 (RNA_pol_Rpb8)
-
PIRSF000779 (RPB8)
-
-
-
SSF50249 (Nucleic a...)
-
no IPR
Unintegrated signatures
Protein sequence
>MIA_04123_1 MSATLFDDIFKVESVDTARYDRVTRITAQSSSDPQVRLTLDVNCELFPLQQGNTISLAVAQTLSLDGEIKPPTTGWREPK PGERSLADDYDYVMYGTVYKFEESSGDFISCYISFGGLLMALEGGYRKLSNLKQENVYLLLRR
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
Molecular Function
None predicted.
Cellular Component
None predicted.