Protein
MIA_03910_1
Length
341 amino acids
Browser: contig05:245329-246355-
Protein function
| EGGNOG: | 0PFWE | PGUG_04533 | 3' exoribonuclease family protein (Rrp42) |
|---|---|---|---|
| SGD closest match: | S000002269 | RRP42 | Exosome complex component RRP42 |
| CGD closest match: | CAL0000183621 | RRP42 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03429_1 | 59.383% | 389 | 1.51e-150 | MCA_03429_1 |
| A0A0J9XBA5_GEOCN | 52.975% | 353 | 4.03e-121 | Similar to Saccharomyces cerevisiae YDL111C RRP42 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA08s01044g PE=4 SV=1 |
| A0A1E3PRN9_9ASCO | 43.385% | 325 | 6.80e-83 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81962 PE=4 SV=1 |
| A0A167DLB6_9ASCO | 41.515% | 330 | 5.90e-80 | Rrp42p OS=Sugiyamaella lignohabitans GN=RRP42 PE=4 SV=1 |
| UniRef50_A0A167DLB6 | 41.515% | 330 | 1.62e-76 | Rrp42p n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167DLB6_9ASCO |
| Q6C9I2_YARLI | 41.590% | 327 | 5.48e-77 | YALI0D11000p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D11000g PE=4 SV=1 |
| A0A060T7X1_BLAAD | 39.820% | 334 | 1.50e-69 | ARAD1D05632p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D05632g PE=4 SV=1 |
| A0A1D8PLY1_CANAL | 41.544% | 272 | 5.89e-62 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RRP42 PE=4 SV=1 |
| RRP42_YEAST | 37.643% | 263 | 1.68e-55 | Exosome complex component RRP42 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP42 PE=1 SV=1 |
| A0A1E4TEG2_9ASCO | 26.937% | 271 | 4.75e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_101173 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2095
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Domain
1
50
100
150
200
250
300
341
Detailed signature matches
Protein sequence
>MIA_03910_1 MVRLSPAEYSYLRTSLETVPPVRPDARTVAQFRPLQAATNFMPTCYGSARVRTADGGECIVGIKAKVARTATSKLINVSI DMSGTRDDDPALANIALTFEKLLQDSPILTAEKLRLTSRFSFTLFIDALVLAHNGNNPLNLLSLTIYLALMSTRLPKLIS STDDSAAEEIPVFDDDWENSVPLTGLIDGQAPDRRHDLLLDGKQITPEQAALFYKTTPWKPPILFVFAVIGNSILIDPSL EEEAVADGTLTIGWQQGKVVAPMRYMETYSSSSTAAATSFVDPSTTKQTSSLAKSGGINLDILKKAYELALDAGADVTES LDLIIKLDREEEAESGPPAMF
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.