Protein
MIA_03853_1
Length
746 amino acids
Browser: contig05:54338-56767-
Protein function
| EGGNOG: | 0PIPU | PGUG_04213 | heterogeneous nuclear ribonucleoprotein HRP1 |
|---|---|---|---|
| SGD closest match: | S000005483 | HRP1 | Nuclear polyadenylated RNA-binding protein 4 |
| CGD closest match: | CAL0000180372 | orf19.5989 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_02266_2 | 88.144% | 194 | 8.23e-119 | MCA_02266_2 |
| A0A0J9X4G9_GEOCN | 84.066% | 182 | 3.31e-105 | Similar to Saccharomyces cerevisiae YOL123W HRP1 Subunit of cleavage factor I, a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends OS=Geotrichum candidum GN=BN980_GECA02s04960g PE=4 SV=1 |
| UniRef50_A0A0J9X4G9 | 84.066% | 182 | 6.77e-102 | Similar to Saccharomyces cerevisiae YOL123W HRP1 Subunit of cleavage factor I, a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4G9_GEOCN |
| A0A1E3PP49_9ASCO | 53.795% | 303 | 6.64e-98 | RNA-binding domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45392 PE=4 SV=1 |
| A0A060SZC4_BLAAD | 58.750% | 240 | 1.59e-90 | ARAD1C06402p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C06402g PE=4 SV=1 |
| A0A161HH86_9ASCO | 57.563% | 238 | 7.14e-82 | Hrp1p OS=Sugiyamaella lignohabitans GN=HRP1 PE=4 SV=1 |
| Q6CC04_YARLI | 55.649% | 239 | 5.06e-80 | YALI0C13860p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C13860g PE=4 SV=1 |
| HRP1_YEAST | 57.059% | 170 | 1.95e-67 | Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRP1 PE=1 SV=1 |
| Q5ANB5_CANAL | 56.707% | 164 | 5.80e-63 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5989 PE=4 SV=1 |
| A0A1E4TFP8_9ASCO | 51.807% | 166 | 2.51e-59 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_26233 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0387
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
746
Detailed signature matches
-
-
cd12577 (RRM1_Hrp1p)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Residue annotation
-
RNA binding site c...
Protein sequence
>MIA_03853_1 MSTFDDDDDFFADIYDGSNEPPKSDVKDEKEERTDSSSIVQNDLPVERNETQVQANSNENITLDSVKFEPEFLQGLQVTE NDAEAGNNPKRDGSATNTGQIYIPPKDEGKMFVGGLNWETTDESLRNYFSKFGELVDCTVMRDNMTGRSRGFGFLTFADP KCVNDVISTEHFLDGRIIDPKRAIPREEQDKTAKIFVGGVGLDVTEDDFNSFFSQYGTVIDAQLMIDTKTGKPRGFGFIT FDSHEAVEKIVSEPVLILKGKMIEVKKAEPRSKDQNGNFIPNSHAQSNVQTDSNNRFNNYNNYMGYSMNGMNSASMPSMG GTMSNSGVNASTSGMNPAMALQYYRNWQQYFDQAETVLINQGAQSSPTGIQQLQNIKAMKQNLLSQMEAFGLNPNMLNSS SDSSQTPENAQSLLSDTKYSTQNGPGFESLGESSGKLSGENKAPFGSGNEPHESKGKAVKGVYNAPNGTDNETNRYHPRA PKGFNQQPYNSSQNESKHYNGKNSAAITLVQGEGNNYSDISSSKPENYSNNAELNHRDRDRERDRENDSVNSKYNRNRYP REQVREKRHRSRYENEEEGGDNEDERESGDKSKLSSHSHRSSRDKSHKSRDMSLGARIREDSREGPSRKRHRGEDDRDTS SSRHHRSSSRDKDHRPSRHKESSSGSKHHRSSRRSKENRGGDDSNNANRKDSKEKESKEAKDRRSKSPPLNAPTGPRGTS GTSSSRSGSGKGYSRRYRSNRQYNRS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.