Protein

MIA_03846_1

Length
1,175 amino acids

Browser: contig05:38789-42386-

Protein function

EGGNOG:0PGRGBMS1Ribosome biogenesis protein bms1
SGD closest match:S000006138BMS1Ribosome biogenesis protein BMS1
CGD closest match:CAL0000199005BMS1GTPase

Protein alignments

%idAln lengthE-value
MCA_02278_166.030%12040.0MCA_02278_1
A0A060TDJ5_BLAAD60.017%11780.0ARAD1D44374p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D44374g PE=4 SV=1
A0A167FTF3_9ASCO60.335%10740.0GTPase BMS1 OS=Sugiyamaella lignohabitans GN=BMS1 PE=4 SV=1
UniRef50_H2B17552.794%11990.0Uncharacterized protein n=11 Tax=saccharomyceta TaxID=716545 RepID=H2B175_KAZAF
A0A0J9XE99_GEOCN60.611%5890.0Similar to Saccharomyces cerevisiae YPL217C BMS1 GTPase required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0 OS=Geotrichum candidum GN=BN980_GECA11s03519g PE=4 SV=1
A0A1E3PPR3_9ASCO62.306%5810.0DUF663-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_69092 PE=4 SV=1
Q6CB53_YARLI69.157%4150.0YALI0C21846p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21846g PE=4 SV=1
A0A1D8PJ43_CANAL58.686%4723.93e-173GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BMS1 PE=4 SV=1
A0A1E4TLL8_9ASCO60.671%4174.57e-173Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17495 PE=4 SV=1
BMS1_YEAST56.436%6063.75e-172Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2743

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1175

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR030387
    Bms1/Tsr1-type G domain
    1. PS51714 (G_BMS1)
  3. Domain IPR012948
    AARP2CN
    1. PF08142 (AARP2CN)
    2. SM00785 (aarp2cn2)
  4. Domain IPR007034
    Ribosome biogenesis protein BMS1/TSR1, C-terminal
    1. SM01362 (DUF663_2)
    2. PF04950 (RIBIOP_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:2.40.10...
  3. G3DSA:3.40.50...
  4. cd01882 (BMS1)
  5. mobidb-lite (disord...)

Residue annotation

  1. G1 box cd01882
  2. GTP/Mg2+ binding s...
  3. Switch I region cd...
  4. G2 box cd01882
  5. G3 box cd01882
  6. Switch II region c...
  7. G4 box cd01882
  8. G5 box cd01882

Protein sequence

>MIA_03846_1
MDVQQQSNKPHRASKSDNTAKKKLHVNGNNAKAFAVNAPGKLQRQAMRSSDIKEKRFHVPMVDRTPEEPPPVIVAVVGPP
GTGKSTLIRSLVRRYTKHTLTDIKGPITVVSGKRRRLTFIECSNDLNSMIDIAKIADLILLLIDGNFGFEMETMEFLNIL
SPHGFPRILGVTTHLDLFKKVSTMRNSKKQLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLARFISVMKFRPLKWRN
EHAYMLSDRVSDLTHPSLIEKNPKIDRRIALYGYLHGSPLSYSNAKVHIPGIGDLTVSEAERLPDPCPTPFAIKMEDEKV
VSGGATKSKGRRRLDDKLKTIYAPMSDVGGVLIDKDAVYIDIGSKSFTPGEEIGVGEKLVTDLQSTSATLGDISTKSGIQ
LFSESQTLHAVDDTLLNDDEDEIEEEVLSRGRTSLRNANAIEENNIDSLEENVDDDDADDAYDDDDDDDEDEDGYSQKDV
QRKIRQKNLMETTDFSDSDVKKGDEFVFADTDSEIGEDDAEFGELHLGADDSEVAALRWKELQEANSTSKKSHRKWDISK
LIYMNNISPNEVINMWKGISQDSDDEKIEEDDDFFQKKNLNDNLDSVDSGQTNYGDIAFLVKKWETEDAFASISDRFYKS
TTGISDSANIAAKEDEEDEEVFGDFEDLEAQDDNEEVDESKSNNQQNSSEESEEGHQKSVDEVRAENMAKKAKQRLEIEG
LSEDIDREFGAEDPEGEDEHETWHDLQKAKIAKQIEINNAELQQLDVATRDRIEGYRAGTYIRLVFENVPFEFIENFDPR
YPVLVGSLLTNEDRFGYSQVRIKRHRWHKRVLKSNDPLIISLGWRRFQTIPIYTTSDSRTRNRMLKYTPEHMHCTATFYG
PLVSPNTGFCAVQNVSEDKKVGNFRICATGTIMEVNQNVEIVKKLKLVGYPYKIYKNTAFIRGMFSSALEVAKFEGASIK
TVSGIRGQIKRSLANPDGAFRATFEDKVLMSDIVFLRAWHQILPRKFYNPVTSLLLKDKENWNGMRLTGVVRAEQGIPTP
LLENSKYNKIERLTPQFKKLHVPKALMNNLPFTELPKTIKSRGKETYLQKRAVVLGGEEKKARDFMEKVFALEKDKRDKR
DTKNREKLIEKEKKRTAIEDKKKEKAKEKKKDYFQTVGLKRSHSGKADRSSKKRH

GO term prediction

Biological Process

GO:0042254 ribosome biogenesis

Molecular Function

None predicted.

Cellular Component

GO:0005634 nucleus