Protein
MCA_02278_1
Length
1,188 amino acids
Gene name: BMS1
Description: Ribosome biogenesis protein BMS1
Browser: contigB:788240-791870+
RNA-seq: read pairs 3399, FPKM 35.3, percentile rank 57.4% (100% = highest expression)
Protein function
| Annotation: | BMS1 | Ribosome biogenesis protein BMS1 | |
|---|---|---|---|
| KEGG: | K14569 | BMS1 | ribosome biogenesis protein BMS1 |
| EGGNOG: | 0PGRG | BMS1 | Ribosome biogenesis protein bms1 |
| SGD closest match: | S000006138 | BMS1 | Ribosome biogenesis protein BMS1 |
| CGD closest match: | CAL0000199005 | BMS1 | GTPase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A167FTF3_9ASCO | 59.00% | 1144 | 0.0 | GTPase BMS1 OS=Sugiyamaella lignohabitans GN=BMS1 PE=4 SV=1 |
| MIA_03846_1 | 67.18% | 649 | 0.0 | MIA_03846_1 |
| A0A060TDJ5_BLAAD | 64.26% | 484 | 0.0 | ARAD1D44374p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D44374g PE=4 SV=1 |
| A0A0J9XE99_GEOCN | 71.06% | 425 | 0.0 | Similar to Saccharomyces cerevisiae YPL217C BMS1 GTPase required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0 OS=Geotrichum candidum GN=BN980_GECA11s03519g PE=4 SV=1 |
| A0A1E3PPR3_9ASCO | 61.96% | 581 | 0.0 | DUF663-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_69092 PE=4 SV=1 |
| Q6CB53_YARLI | 58.20% | 488 | 0.0 | YALI0C21846p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21846g PE=4 SV=1 |
| A0A1E4TLL8_9ASCO | 59.96% | 467 | 9e-176 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17495 PE=4 SV=1 |
| UniRef50_A0A1E4TLL8 | 59.96% | 467 | 3e-172 | Uncharacterized protein (Fragment) n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TLL8_9ASCO |
| A0A1D8PJ43_CANAL | 58.11% | 487 | 2e-168 | GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BMS1 PE=4 SV=1 |
| BMS1_YEAST | 56.26% | 487 | 2e-160 | Ribosome biogenesis protein BMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BMS1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0332
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
200
400
600
800
1000
1188
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd01882 (BMS1)
-
mobidb-lite (disord...)
Residue annotation
-
G1 box cd01882
-
GTP/Mg2+ binding s...
-
Switch I region cd...
-
G2 box cd01882
-
G3 box cd01882
-
Switch II region c...
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G4 box cd01882
-
G5 box cd01882
Protein sequence
>MCA_02278_1 MENQANKPHRPSKDVKTAKKKLHANGKNVKAFAVNAPGKLQRQALRSSDLKEKRFHVPMVDRTPEEPPPVIVAVVGPPGT GKSTLIRSLVRRFTKHTLSDIKGPITVVSGKRRRLTFMECSNDLNSMIDIAKIADLILLMIDGNFGFEMETMEFLNILAP HGFPRILGVTTHLDLFKKTATMRNAKKQLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLARFISVMKFRPLKWRNEH SYMICDRMSDLTHPTLIENNPKVDRKVALYGYIHGSPLPYSNARVHIPGVGDLTVKDAERLPDPCPTPYAIKMEDERVAS GDGSAPKRRRRLDEKLKTIYAPMSDVGGVLIDKDAVFIDVGTKSFTPGEELGVGEKMVTDLQAATKTLGETESAPGIQLF SHGKTLKAVEEFDELESDVEDEEDNGEEGSRGRTSLRHGNTAGDSGRISEFNENIKEEDEDAIELEEVDFSNKYNDDNNE LADMKSKHGDEFVFADTDSELGDDDADFGKYGAFGEGDDDEEAALRWKSQFLEDSKTSKYKRKWNISKLIYMENITPESV IQRWRGEDEEEDGEDELSDDEDGFFKKKAEEGKDEVADRNQIEYDDMNELVNKWTEETAFELISKRFHVSSGANTIKIPG TQDEDDEEEVFGDFEDLEEDENNEEKAKANSDEDNTDSENEDEDGSENEDDEEEKSNKEKTIEEIRAENLAKKNKERLEM EEFNDSVEDRDFGAFDPEKEEDPEYDTWHDMQKAKIAKQLEINKEELSQLDVATRDKIEGFKAGTYIRLVFEDVPCEFVE NFDPIYPIIVGSLAANEDRFGFSKARIKRHRWHKRILKSNDPLIISLGWRRFQTIPIYTTSDSRTRNRMLKYTPEHMYCN VTFYGPLVSPNTGFCCVQNVSQENVTGSFRISATGTIEEIDQTFEIVKKLKLVGHPYKIYKNTAFIKDMFTSALEVAKFE GASIKTVSGIRGQIKRALANPDGAFRAAFEDKILISDIIILRAWHQIVPRKFYNPVTSLLLKDKKNWTGMRLTGVVRAEK NIPTPLPENSKYSKVERLTPVFKQLHVPKKISTNLPFSELPKVEGMSVTRDGPRGKKSYLEKRAIVVGGEEKKTREFMEK VVAIQKEKQEKRQAKKQEKLKERQKELDKIAEKRLSAQRSRKKDYFAKASLKRGNSDGDGHSHKRSRK
GO term prediction
Biological Process
GO:0042254 ribosome biogenesis
Molecular Function
None predicted.
Cellular Component
GO:0005634 nucleus