Protein

MIA_03842_1

Length
844 amino acids

Browser: contig05:32172-34926+

Protein function

EGGNOG:0PFS1FG05844.1beta' subunit
SGD closest match:S000003105SEC27Coatomer subunit beta'
CGD closest match:CAL0000201645SEC27Coatomer subunit beta'

Protein alignments

%idAln lengthE-value
MCA_02141_171.602%8240.0MCA_02141_1
A0A0J9XE03_GEOCN71.149%8180.0Coatomer subunit beta' OS=Geotrichum candidum GN=BN980_GECA11s03552g PE=3 SV=1
A0A1E3PP70_9ASCO65.488%8200.0Coatomer subunit beta' OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45399 PE=3 SV=1
A0A161HFR9_9ASCO69.150%7650.0Coatomer subunit beta' OS=Sugiyamaella lignohabitans GN=SEC27 PE=3 SV=1
A0A060TI80_BLAAD64.369%7690.0Coatomer subunit beta' OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D44418g PE=3 SV=1
Q6CB55_YARLI60.595%8070.0Coatomer subunit beta' OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21802g PE=3 SV=2
UniRef50_Q6CB5560.595%8070.0Coatomer subunit beta' n=100 Tax=Opisthokonta TaxID=33154 RepID=Q6CB55_YARLI
A0A1E4TF13_9ASCO56.880%8140.0Coatomer subunit beta' OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_105966 PE=3 SV=1
COPB2_YEAST54.479%8260.0Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC27 PE=1 SV=1
A0A1D8PPV5_CANAL50.928%8620.0Coatomer subunit beta' OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC27 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0316

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
  4. Repeat
  5. Repeat
1 100 200 300 400 500 600 700 844

Detailed signature matches

  1. Family IPR016453
    Coatomer beta' subunit (COPB2)
    1. PIRSF005567 (Beta'-COP)
  2. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  3. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
  4. Domain IPR011041
    Soluble quinoprotein glucose/sorbosone dehydrogenase
    1. SSF50952 (Soluble q...)
  5. Domain IPR006692
    Coatomer, WD associated region
    1. PF04053 (Coatomer_WDAD)
  6. Domain IPR011990
    Tetratricopeptide-like helical domain
    1. G3DSA:1.25.40.10
  7. Repeat IPR001680
    WD40 repeat
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
  8. Repeat IPR020472
    G-protein beta WD-40 repeat
    1. PR00320 (GPROTEINBRPT)
  9. SITE IPR019775
    WD40 repeat, conserved site
    1. PS00678 (WD_REPEATS_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd00200 (WD40)
  2. mobidb-lite (disord...)

Residue annotation

  1. structural tetrad ...

Protein sequence

>MIA_03842_1
MKFDIKKTLQVRSDRVKGIDFHPTEPWILTTLFSGRVQIYSYETQSVIKTIEVSELPVRAGRFIARKNWIVVGSDDYQIR
VFNYNTSEKVFQFEAHPDYIRTIAIHPTQPIILSAGDDMTIKMWNWEMNWKLLRTFEGHTHYVMYVAFNPKDPNTFASAC
LDGTVKIWSLGSFTPNLTFLAHETRGVNFVEYYPHPDKPYLITSSDDKTIRVWDYQMKSIVAKLEGHTSNVSFAVFHPEL
PIIISGSEDRSVSIWNSNTFKLEQTLNYGLSRAWCVTCKKGSNYIGLGFDCGVVVLQLGKDEPTVSMDPTGKIVWSKHSE
VFSSVVKHSEELKDGDLLTLAQKDLGSVEVFPTQLIHSPNGRFVAVTGDGEYIIYTALAWRNKSFGSAVDFVWAQDNNEY
AVRNVNNQVQLFKNFKERSDSLNVPFKPTKLFGGSLIGCKGEEFVSFYDWETGRLVRRVDVDAQQVFWSDAGDLVAITTE
DTFYVLKYDRDLFLESLNNGTYEEDSGAEDSFDLIYDISEAVRTGKWVGDCFLYTTTSNKLNYLVGGEVYTISHFDKQMY
LLGYIPRDNAVYLADKDVNVTSYHFSLKVLEYQTLILRGDMDLASEVLEEIPDAEKTKVARFLEAQGYPDIALEVSEDPE
QRFDLAITLGNLNIAQKIATEVNNSHKWKLLGDAALKSWNVTLAEECFKQAIDLESLLLIYTSTGNNAGLKEVAAHATDL
GKYNVAFNALWFVQEIDECVKLLNKTNRSPEAALLALTYGDDTSTSVDLWKKQLITSGKQKTATIIISPEDDPNKFPANQ
AQALGNGSVNESEDLIDINEATAESESSQPAEEAQVSQQDISNE

GO term prediction

Biological Process

GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport

Molecular Function

GO:0003824 catalytic activity
GO:0005198 structural molecule activity
GO:0005515 protein binding

Cellular Component

GO:0030117 membrane coat