Protein
MIA_03822_1
Length
146 amino acids
Browser: contig04:2244844-2245413+
Protein function
| EGGNOG: | 0PPJN | RNA polymerase III subunit | |
|---|---|---|---|
| SGD closest match: | S000003548 | RPC17 | DNA-directed RNA polymerase III subunit RPC9 |
| CGD closest match: | CAL0000193163 | orf19.3990 | DNA-directed RNA polymerase III subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_05085_1 | 66.906% | 139 | 1.17e-61 | MCA_05085_1 |
| A0A0J9XJF7_GEOCN | 59.854% | 137 | 3.72e-54 | Similar to Saccharomyces cerevisiae YJL011C RPC17 RNA polymerase III subunit C17 OS=Geotrichum candidum GN=BN980_GECA23s00626g PE=4 SV=1 |
| UniRef50_A0A0J9XJF7 | 59.854% | 137 | 7.61e-51 | Similar to Saccharomyces cerevisiae YJL011C RPC17 RNA polymerase III subunit C17 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJF7_GEOCN |
| A0A060TB78_BLAAD | 45.714% | 140 | 3.26e-34 | ARAD1B13618p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13618g PE=4 SV=1 |
| Q6C8D3_YARLI | 44.444% | 126 | 6.36e-26 | YALI0D20592p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D20592g PE=4 SV=1 |
| A0A1E3PHN6_9ASCO | 40.310% | 129 | 1.11e-23 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52705 PE=4 SV=1 |
| Q5AK30_CANAL | 32.653% | 147 | 2.50e-14 | DNA-directed RNA polymerase III subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3990 PE=4 SV=1 |
| RPC9_YEAST | 28.481% | 158 | 1.04e-12 | DNA-directed RNA polymerase III subunit RPC9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC17 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0354
Protein family membership
- RNA polymerase II, Rpb4 (IPR005574)
Domains and repeats
-
Domain
-
Domain
1
20
40
60
80
100
120
146
Detailed signature matches
no IPR
Unintegrated signatures
Protein sequence
>MIA_03822_1 MKIEEERNSLLLDFEVLRHLDSIRQSRVQADLKQNVKSGPKSENLETILIELHAYLRDRPAGNDAHPQSTDLINTFVKEI KRFELEKAEVLQLINITPQSLPVLYNVIEECDQRFSNEDMEEILRLVSELGFEPQPQQENTNDEEQ
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
GO:0044237 cellular metabolic process
Molecular Function
GO:0000166 nucleotide binding
GO:0003824 catalytic activity
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
Cellular Component
None predicted.