Protein
MIA_03811_1
Length
962 amino acids
Browser: contig04:2224403-2227292+
Protein function
| EGGNOG: | 0PHMJ | DBP10 | ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs (By similarity) |
|---|---|---|---|
| SGD closest match: | S000002189 | DBP10 | ATP-dependent RNA helicase DBP10 |
| CGD closest match: | CAL0000186628 | DBP10 | ATP-dependent RNA helicase DBP10 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XEA3_GEOCN | 68.372% | 860 | 0.0 | Similar to Saccharomyces cerevisiae YDL031W DBP10 Putative ATP-dependent RNA helicase of the DEAD-box protein family OS=Geotrichum candidum GN=BN980_GECA11s03585g PE=4 SV=1 |
| MCA_05154_1 | 65.301% | 879 | 0.0 | MCA_05154_1 |
| A0A167CX74_9ASCO | 61.802% | 877 | 0.0 | Dbp10p OS=Sugiyamaella lignohabitans GN=DBP10 PE=4 SV=1 |
| A0A060T4E8_BLAAD | 61.877% | 863 | 0.0 | ARAD1B02904p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B02904g PE=4 SV=1 |
| DBP10_YARLI | 58.962% | 848 | 0.0 | ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=DBP10 PE=3 SV=1 |
| UniRef50_Q6C7X8 | 58.962% | 848 | 0.0 | ATP-dependent RNA helicase DBP10 n=7 Tax=Saccharomycetales TaxID=4892 RepID=DBP10_YARLI |
| DBP10_CANAL | 54.988% | 862 | 0.0 | ATP-dependent RNA helicase DBP10 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP10 PE=3 SV=1 |
| DBP10_YEAST | 51.299% | 924 | 0.0 | ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DBP10 PE=1 SV=2 |
| A0A1E4TKT9_9ASCO | 51.522% | 854 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_42961 PE=4 SV=1 |
| A0A1E3PEK3_9ASCO | 58.427% | 712 | 0.0 | DEAD-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83931 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0037
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Domain
1
100
200
300
400
500
600
700
800
900
962
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd00079 (HELICc)
-
cd00268 (DEADc)
-
mobidb-lite (disord...)
Residue annotation
-
ATP binding site c...
-
Mg++ binding site ...
-
motif III cd00268
-
nucleotide binding...
-
ATP-binding site c...
Protein sequence
>MIA_03811_1 MSDSEQEIDISKSIGIDIDDSSESEDSSFEKNDYYQDEIIDSSDDESDDDLGSHHKFHQTEKEKDLGGFPSLEMSDEEEN FDDEIQPKENKSLDDDDDDDAFFAKLGAAGGSKKKSIYSFRGMGLSKTICANVARKGYKMATPIQRKTIPVVMEGRDVVG MARTGSGKTAAFVLPMIEKLKVHSARVGARAVILSPSRELAEQTMRVVKDFSRGTDLRVALIVGGYSLEDQFSRIMSNPD IIIATPGRFLHLKVEMQLDLRSIEYIVFDEADRLFELGFAEQLNEIIASLSSSRQTLLFSATLPTSLVEFAKAGLQDPVL VRLDAETKISEELEMAYFTIKDGEREAALAYILQSVIKMPLATEQQLKYLAEEDDDDGDDNYTGKFSKGKNKRFEHRTKL PPANELPSPHSTIVFTPTKHHVEYIAGILRDLGYAVSYIYGTLDQAARKQQLYRFRAGKTTILVVTDVAARGIDIPVLAN VINYSLPSSPKVFVHRVGRTARAGRRGWAYSLIRESDIAYLLDLELFLGRKILLPFQVQLGERINYTERLVIGSLPREGL EQSMEEVESVIKRNYDIQNMRDVANRGEKLYLKTRGNASQESSKRSKDIISSEKWDGRHPLFGNESSEAKRDQFLQRLAN RRVKDTVFEFKKTQYGSTAELMARRRKQLAPIQARSLEKKNIISKEKEAGLVHSMDAELFKDEDIDDEKSKKPSDNQKLA TEKDILNIFTEVEDTRSKKKKQKDFKDPNFYLSHYAPSSVAEERAYSISGNNGKFFGEAARAATFNLVDEGNDFIQKQGM KWDKKRGKYINAGSTSADGQSIKYIRGENGTKIPASYRSGRFDSWKKAHKTGNLRVGSFESSTGPNQYVAPGSNVATGAN GKPIYKHNKVQAPKLADKARDDYHKQRKRVKAALEKGIRVKGKQPIFNGDSELQSVDQMRKARALKEQRREKNGRPSKKK KV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0004004 ATP-dependent RNA helicase activity
GO:0005524 ATP binding
Cellular Component
GO:0005634 nucleus