Protein

MIA_03802_1

Length
137 amino acids

Browser: contig04:2201122-2201536+

Protein function

EGGNOG:0PMXHTIF51Translation initiation factor
SGD closest match:S000000760HYP2Eukaryotic translation initiation factor 5A-1
CGD closest match:CAL0000197571ANB1Eukaryotic translation initiation factor 5A

Protein alignments

%idAln lengthE-value
IF5A1_YEAST82.222%1355.09e-81Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HYP2 PE=1 SV=3
UniRef50_P2330182.222%1351.22e-77Eukaryotic translation initiation factor 5A-1 n=88 Tax=Eukaryota TaxID=2759 RepID=IF5A1_YEAST
IF5A_CANAL79.562%1378.04e-81Eukaryotic translation initiation factor 5A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ANB1 PE=3 SV=2
A0A060T3Y9_BLAAD77.372%1372.70e-79Eukaryotic translation initiation factor 5A OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A13046g PE=3 SV=1
A0A0J9XA14_GEOCN80.147%1367.91e-79Eukaryotic translation initiation factor 5A OS=Geotrichum candidum GN=BN980_GECA05s04586g PE=3 SV=1
MCA_03565_179.259%1352.96e-78MCA_03565_1
A0A1E3PJP0_9ASCO78.832%1373.57e-78Eukaryotic translation initiation factor 5A OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82569 PE=3 SV=1
A0A1E4TD66_9ASCO77.778%1351.06e-77Eukaryotic translation initiation factor 5A OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32883 PE=3 SV=1
A0A167E415_9ASCO78.519%1354.27e-76Eukaryotic translation initiation factor 5A OS=Sugiyamaella lignohabitans GN=ANB1 PE=3 SV=1
Q6CCS7_YARLI75.182%1372.38e-75Eukaryotic translation initiation factor 5A OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C06886g PE=3 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2281

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 20 40 60 80 100 120 137

Detailed signature matches

  1. Family IPR001884
    Translation elongation factor IF5A
    1. PIRSF003025 (Transl...)
    2. TIGR00037
  2. Domain IPR014722
    Ribosomal protein L2 domain 2
    1. G3DSA:2.30.30.30
  3. Domain IPR008991
    Translation protein SH3-like domain
    1. SSF50104 (Translati...)
  4. Domain IPR012340
    Nucleic acid-binding, OB-fold
    1. SSF50249 (Nucleic a...)
  5. Domain IPR020189
    Translation elongation factor, IF5A C-terminal
    1. PF01287 (eIF-5a)
    2. SM01376 (eIF_5a_2)
  6. SITE IPR019769
    Translation elongation factor, IF5A, hypusine site
    1. PS00302 (IF5A_HYPUSINE)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:2.40.50...
  2. cd04468 (S1_eIF5A)

Residue annotation

  1. RNA binding site c...

Protein sequence

>MIA_03802_1
MQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPNVSRNEYQLLNIDDGFL
NLINDSGDEKNDVKLPEGDLGNEIQDAFDAEKDVLVTLISAMNEEAAISWKEAPKGN

GO term prediction

Biological Process

GO:0006452 translational frameshifting
GO:0045901 positive regulation of translational elongation
GO:0045905 positive regulation of translational termination

Molecular Function

GO:0003723 RNA binding
GO:0003746 translation elongation factor activity
GO:0043022 ribosome binding

Cellular Component

None predicted.